CF834731

Overview
NameCF834731
Unique NameCF834731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13382 contig Csv1_Contig13382:13..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.396e-59
Identity = 110/134 (82.09%), Postives = 124/134 (92.54%), Query Frame = -1
Query:  265 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNL 666
            DAGGIILLFQDD+VSGLQLLKD+QW+DVPPM+HSIV+NLGDQLEVITNGKYKSV+HRVIAQT+G RMS+ASFYNPG+DAVIYPAP+L+E+   + QVYPKFVF+DYMKLYAGLKFQ KEPRFEAMK ME  V L
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPAPSLIEE---SKQVYPKFVFDDYMKLYAGLKFQPKEPRFEAMKAMEANVEL 309          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.793e-59
Identity = 115/142 (80.99%), Postives = 126/142 (88.73%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEA--MKNMETIVNLGPIAT 666
            DAGG+ILLFQDD V+GLQLLKD +WVDVPPM HSIVINLGDQ+EVITNGKYKSV+HRV+AQT+GNRMS+ASFYNPGSDAVI+PAPALVEKEA    +VYPKFVFEDYM LYAGLKFQAKEPRFE   MK +ET  NL PI T
Sbjct:  180 DAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGNRMSLASFYNPGSDAVIFPAPALVEKEAEEKKEVYPKFVFEDYMNLYAGLKFQAKEPRFEVMKMKAVET-ANLSPITT 320          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.291e-58
Identity = 109/144 (75.69%), Postives = 127/144 (88.19%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-----VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 666
            DAGGIILLFQDD+VSGLQLLKD +W+DVPP++HSIV+N+GDQLEVITNGKYKSVLHRV+AQT+GNRMSIASFYNPGSDAVI+PAPALVEKEA        ++YPKFVF+DYM LY   KF+AKEPRFEAMK+ME +++  PI T
Sbjct:  183 DAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKEIYPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSSQPIPT 326          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.686e-58
Identity = 109/132 (82.58%), Postives = 123/132 (93.18%), Query Frame = -1
Query:  277 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV--NSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMET 666
            DAGGIILLFQDD+VSGLQLLKD +W+DVPPM+HSIV+NLGDQLEVITNGKYKSV+HRVIAQ +G RMS+ASFYNPG+DA+IYPAPALV+KEA   N QVYPKF+F+DYMKLYA LKFQAKEPRFEAMK ME+
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAKEPRFEAMKAMES 310          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.904e-58
Identity = 114/141 (80.85%), Postives = 127/141 (90.07%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQ-VYPKFVFEDYMKLYAGLKFQAKEPRFEAM-KNMETIVNLGPIAT 666
            DAGGIILLFQDD+V+GLQLLKD QW+DVPPM+ SIV+NLGDQLEVITNGKYKSV+HRVI QT+G RMS+ASFYNPGSDAVI+PAP LVEKEA  S+ +YPKFVF+DYMKLYAGLKFQAKEPRFEAM K MET V   P+AT
Sbjct:  179 DAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKEAEESKAIYPKFVFDDYMKLYAGLKFQAKEPRFEAMIKAMET-VKSDPVAT 318          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.365e-58
Identity = 110/140 (78.57%), Postives = 123/140 (87.86%), Query Frame = -1
Query:  247 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 666
            DAGGIILLFQDD+VSGLQLLKDDQW+DVPPM+HSIVINLGDQLEVITNGKYKSV+HRVIAQT+G RMSIASFYNPG DAVI PA  L+ KE   S+VYPKFVF+DYMKLY GLKFQAKEPRFEAM    + V +GP+ ++
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGDDAVISPASTLL-KENETSEVYPKFVFDDYMKLYMGLKFQAKEPRFEAMMKAMSSVKVGPVVSI 317          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.093e-57
Identity = 107/142 (75.35%), Postives = 127/142 (89.44%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA---VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 666
            DAGGIILLFQDD+VSGLQLLKD +W++VPP+++SIV+N+GDQLEVITNGKYKSVLHRV+AQT+GNRMSIASFYNPGSDAVI+PAPALVEKEA      ++YPKFVF+DYM LY   KF+AKEPRFEAMK+ME +++  PI T
Sbjct:  183 DAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSSQPIPT 324          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.208e-56
Identity = 111/142 (78.17%), Postives = 123/142 (86.62%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEG-NRMSIASFYNPGSDAVIYPAPALVEK--EAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 666
            DAGGIILLFQDD+VSGLQLLKD  W+DVPPM+H+IV+NLGDQLEVITNG+YKSV+HRV+ QT G  RMSIASFYNPGSDAVIYPAPALVEK  +    +VYPKFVFEDYMKLY G+KFQAKEPRFEAMK      NLGP+AT
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKDQDEEKKEVYPKFVFEDYMKLYLGVKFQAKEPRFEAMK---ANANLGPMAT 317          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.060e-56
Identity = 111/144 (77.08%), Postives = 127/144 (88.19%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEG-NRMSIASFYNPGSDAVIYPAPALVEKEA--VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIV--NLGPIAT 666
            DAGGIILLFQDD+VSGLQLLKD +WVDVPP+KHSIV+NLGDQLEVITNGKYKSV HRV++QT+G  RMSIASFYNPGSD+VI+PAP L+ KEA     + YP+FVFEDYMKLY+ +KFQAKEPRFEAMK MET V  N+GP+AT
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAKEPRFEAMKAMETTVANNVGPLAT 322          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.590e-56
Identity = 106/139 (76.26%), Postives = 123/139 (88.49%), Query Frame = -1
Query:  250 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 666
            DAGGIILLFQDD+VSGLQLLKD +WVDVPPM HSIVINLGDQ+EVITNGKYKSV+HRVIAQ++G RMSIASFYNPG+D+ I PAPA++EK+  ++  YPKFVF+DYMKLY+GLKFQAKEPRFEAMK  E+     P+AT
Sbjct:  179 DAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDYMKLYSGLKFQAKEPRFEAMKAKEST----PVAT 313          
The following BLAST results are available for this feature:
BLAST of CF834731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
ACCO4_SOLLC3.396e-5982.091-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO_PERAE5.793e-5980.991-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO1_DORSP1.291e-5875.691-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO2_SOLLC1.686e-5882.581-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO_TOBAC4.904e-5880.851-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_PEA8.365e-5878.571-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO2_DORSP1.093e-5775.351-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO1_CUCME1.208e-5678.171-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO1_ARATH2.060e-5677.081-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO1_MALDO4.590e-5676.261-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834731 ID=CF834731; Name=CF834731; organism=Citrus sinensis; type=EST; length=666bp
TTTTTTTTTTTTTTTTTATGAGGCCAATATAATCTTATATAATTTCATCT
GAAACAGGAGGAATACAGTATTCCATTTGGTCACTTTCTACAATAAATAC
CTGAAACACCACGACCACCGTCGACTTTGACTCCACAAGAACTATGATCA
GTCCGAGCTTTCGGCTTATTTTAAAAACTATATATGTTCCACACTAGCCA
ACACAAACAACTCAGCTCTAACACCAAAGAGCCATAGGGGAACTCAAACA
GTTGCAATAGGACCCAGATTCACAATGGTCTCCATGTTCTTCATGGCTTC
AAACCTTGGCTCCTTGGCCTGAAACTTCAGCCCAGCATAGAGTTTCATGT
AATCCTCGAACACAAATTTCGGATAAACTTGGCTGTTCACAGCCTCCTTC
TCCACCAATGCTGGTGCCGGGTAGATCACAGCATCACTGCCTGGATTGTA
AAATGATGCTATGGACATCCTGTTACCCTCTGTTTGAGCAATCACGCGAT
GTAGCACACTCTTGTACTTGCCATTGGTTATCACCTCAAGTTGGTCACCG
AGGTTGATGACAATGGAGTGTTTCATGGGTGGAACATCAACCCATTGGTC
ATCTTTGAGCAGCTGGAGGCCACTGACTTCGTCATCTTGAAAGAGCAAGA
TGATGCCACCAGCATC
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