CF834731

Overview
NameCF834731
Unique NameCF834731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13382 contig Csv1_Contig13382:13..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.414e-14
Identity = 49/142 (34.51%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  271 DAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEP--RFEAMKNMETIV 666
            D G I LL QD +V GLQ  +DD   W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +R+SIA+F NP  +A +YP        A++E+    +++Y + +  D     A LK  AKE     EA K ++ I+
Sbjct:  218 DPGTITLLLQD-QVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKVREGEKAIMEEPITFAEMYKRKMGRDLE--LARLKKLAKEEHNHKEAAKPLDQIL 356          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.683e-14
Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = -1
Query:  343 IILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 654
            II + + +  SGLQ+ L D  WV VPP + S  IN+GD L+V+TNG++KSV HRV+A T  +R+S+  F  P     I P P+++ K      +Y +F + +Y K
Sbjct:  209 IISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSMIYFGGPALSENIAPLPSVMLKG--EECLYKEFTWCEYKK 311          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.683e-14
Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = -1
Query:  322 ILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP---GSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKF 651
            + +   D + GLQ+L D  WVDVPP+  ++V+N+GD L++ITN K+ SV HRV+A   G R+S+A F++     +  V  P   ++ +E  N   Y      +Y K Y    F
Sbjct:  244 LTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEE--NPPNYRDTTITEYAKFYRSKGF 354          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.265e-13
Identity = 39/103 (37.86%), Postives = 62/103 (60.19%), Query Frame = -1
Query:  349 IILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 654
            II + + +  SGLQ+ L D  W+ VPP   S   N+GD L+V+TNG++KSV HRV+A  + +R+S+  F  P     I P   L++ E  + ++Y +F + +Y
Sbjct:  202 IISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNE--DERLYEEFTWSEY 302          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-13
Identity = 41/125 (32.80%), Postives = 67/125 (53.60%), Query Frame = -1
Query:  280 IILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNME 654
            +I L     V+GL++     W+ V P  ++ V+N G QLEV+TNG  KS+ HR +  +   R S+A+F  P  + +I PA   + KE  N   Y   +F D+M++Y  +K  +       +KN++
Sbjct:  214 LITLLLPGAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECLIGPAKEFLSKE--NPPCYRTTMFRDFMRIYNVVKLGSSLNLTTNLKNVQ 336          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-13
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = -1
Query:  352 DAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFED 666
            D G I LL QD +V GLQ  +D    W+ V P+  + V+NLGD    ++NG++K+  H+ +  +E +R+SIA+F NP  DA +YP   L  +E  NS +     F D
Sbjct:  220 DPGTITLLLQD-QVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYP---LAIREGENSIMEEPITFAD 322          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-13
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = -1
Query:  448 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFY 666
            D G + +L QDD + GLQ+L  + WVDVPP   S+V+N+GD L++++N KY SV HR I+   G+RMSI  F+
Sbjct:  238 DIGFVTILLQDD-MGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFF 309          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 36/102 (35.29%), Postives = 60/102 (58.82%), Query Frame = -1
Query:  346 ILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 651
            I +   +EV GLQ+ KD  W DV  + +++++++GDQ+E+++NGKYKSV HR     +  RMS   F  P S+  + P P L+ +   N   +    ++DY+
Sbjct:  240 ITILVPNEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSE--ANPPKFKTKKYKDYV 339          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = -1
Query:  349 ILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 651
            I +   +EV GLQ+ KD  W D   + +++++++GDQ+E+++NGKYKSV HR     E  RMS   F  P  D  + P P LV +E  N   +    ++DY
Sbjct:  226 ITVLVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVFLEPPPDHEVGPIPKLVNEE--NPAKFKTKKYKDY 324          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 43/122 (35.25%), Postives = 73/122 (59.84%), Query Frame = -1
Query:  322 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFY------NPGSDAVIY-PAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKF 666
            D+G + +L QD ++ GLQ+L ++QW+DVP +  ++VIN+ D L++ITN K+KSV HRV+A   G R+S+A  +        G    +Y P   L+ +E  N  +Y +   +D++ +    +F
Sbjct:  270 DSGFLTILMQD-QIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEE--NPPIYKEVTVKDFITIRFAKRF 388          
The following BLAST results are available for this feature:
BLAST of CF834731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FL3H_MATIN7.414e-1434.51Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
G2OX_PHACN9.683e-1440.95Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
ACCH1_ARATH9.683e-1436.281-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G2OX1_ARATH1.265e-1337.86Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
IDS3_HORVU1.652e-1332.802'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
FL3H_DIACA1.652e-1339.25Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
ACCH3_SOLLC1.652e-1349.321-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_PETHY2.817e-1335.29Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FLS_EUSGR2.817e-1337.62Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
DV4H_CATRO2.817e-1335.25Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834731 ID=CF834731; Name=CF834731; organism=Citrus sinensis; type=EST; length=666bp
TTTTTTTTTTTTTTTTTATGAGGCCAATATAATCTTATATAATTTCATCT
GAAACAGGAGGAATACAGTATTCCATTTGGTCACTTTCTACAATAAATAC
CTGAAACACCACGACCACCGTCGACTTTGACTCCACAAGAACTATGATCA
GTCCGAGCTTTCGGCTTATTTTAAAAACTATATATGTTCCACACTAGCCA
ACACAAACAACTCAGCTCTAACACCAAAGAGCCATAGGGGAACTCAAACA
GTTGCAATAGGACCCAGATTCACAATGGTCTCCATGTTCTTCATGGCTTC
AAACCTTGGCTCCTTGGCCTGAAACTTCAGCCCAGCATAGAGTTTCATGT
AATCCTCGAACACAAATTTCGGATAAACTTGGCTGTTCACAGCCTCCTTC
TCCACCAATGCTGGTGCCGGGTAGATCACAGCATCACTGCCTGGATTGTA
AAATGATGCTATGGACATCCTGTTACCCTCTGTTTGAGCAATCACGCGAT
GTAGCACACTCTTGTACTTGCCATTGGTTATCACCTCAAGTTGGTCACCG
AGGTTGATGACAATGGAGTGTTTCATGGGTGGAACATCAACCCATTGGTC
ATCTTTGAGCAGCTGGAGGCCACTGACTTCGTCATCTTGAAAGAGCAAGA
TGATGCCACCAGCATC
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