CF834731

Overview
NameCF834731
Unique NameCF834731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13382 contig Csv1_Contig13382:13..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 46/141 (32.62%), Postives = 80/141 (56.74%), Query Frame = -1
Query:  274 DAGGIILLFQDDEVSGLQLLKD--DQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPR--FEAMKNMETI 666
            D G I LL QD +V GLQ  +D  + W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +R+SIA+F NP  +A++YP        +++E+     ++Y K +  D     A LK  AK+ +   E +K ++ I
Sbjct:  217 DPGTITLLLQD-QVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSSTSRLSIATFQNPAPEAIVYPLKINEGEKSIMEEPMTFMEMYKKKMSTDLE--LARLKKLAKDKQQDLEVVKPIQNI 354          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13
Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = -1
Query:  310 DAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKE 666
            D G I LL QD +V GLQ  +D    W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +RMSIA+F NP  +A +YP        A++E+    +++Y + +  D     A LK  AKE
Sbjct:  220 DPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRMSIATFQNPAPNATVYPLKIREGEKAVMEEPITFAEMYKRKMSRDIE--MATLKKLAKE 343          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = -1
Query:  256 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPI 666
            D   + +L QD  V+GLQ+  D+QW  + P   + V+N+GD    ++NG +KS LHR +   E  R S+A F  P  D V+ P   ++EK  + ++ YP F +  +++ +    ++A     ++  N   I N  PI
Sbjct:  247 DPSSLTILHQD-HVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILEK--MKTRKYPDFTWSMFLE-FTQKHYRADVNTLDSFSNW-VITNNNPI 378          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13
Identity = 37/102 (36.27%), Postives = 59/102 (57.84%), Query Frame = -1
Query:  346 ILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 651
            I +   +EV GLQ+ KDD W DV  + ++++I++GDQ+E+++NGKYKSV HR     +  RMS   F  P  + +  P   L+  E  N   +    ++DY+
Sbjct:  229 ITILVPNEVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPPELLTGPISKLITDE--NPAKFKTKKYKDYV 328          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12
Identity = 33/103 (32.04%), Postives = 59/103 (57.28%), Query Frame = -1
Query:  343 ILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 651
            + +   D V+GLQ+  ++QW  + P   + V+N+GD    ++N +YKS LHR +  +E  R S+A F  P  D V+ P   L+  +++ S+ YP F +  +++
Sbjct:  253 LTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELL--DSITSRRYPDFTWSMFLE 353          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12
Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = -1
Query:  349 IILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 654
            II + + +  SG Q+ L+D  W+ VPP   S  IN+GD L+V+TNG++KSV HRV+A     R+S+  F  P     I P P+L++ +     +Y +F + +Y
Sbjct:  205 IISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGPPLSEKIAPLPSLMKGK---ESLYKEFTWFEY 304          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12
Identity = 44/131 (33.59%), Postives = 74/131 (56.49%), Query Frame = -1
Query:  298 DAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFE 666
            D G I LL QD +V GLQ  +D    W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +R+SIA+F NP  +A +YP        A++E     +++Y + + +D     A LK  AKE + +
Sbjct:  220 DPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATFQNPAPEATVYPLKIREGEKAVLEGPITFAEMYRRKMSKDLE--LARLKKLAKEQQLQ 347          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = -1
Query:  424 DAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVI 666
            D+  + +L+QD +V GLQL+KD++W+ V P   +++IN+GD  +  +NG YKSV HRV+   +  R S A F  P  DAVI
Sbjct:  217 DSDFLTILYQD-QVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCPSYDAVI 296          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12
Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = -1
Query:  349 IILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 654
            +I L + ++  GLQ+ +KD  WVDV P   S  + +GD L+V+TNG++KSV HRV+  T+ +R+S+  F  P     I P   LV K+  +  +Y +F +  Y
Sbjct:  207 LISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQ--DDCLYNEFTWSQY 307          
BLAST of CF834731 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12
Identity = 34/102 (33.33%), Postives = 55/102 (53.92%), Query Frame = -1
Query:  346 ILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 651
            + +   D V GLQ+  + +W  + P   + V+N+GD    ++NG+YKS LHR +  ++  R S+A F  P  D V+ P   LV  +A N + YP F +   +
Sbjct:  230 LTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLV--DAANPRAYPDFTWRSLL 329          
The following BLAST results are available for this feature:
BLAST of CF834731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FL3H_CALCH3.679e-1332.62Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_PETCR4.806e-1335.43Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
GAOX2_ARATH6.276e-1331.39Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
FLS_PETCR8.197e-1336.27Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
GAOX1_ARATH1.071e-1232.04Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
G2OX1_PEA1.071e-1237.86Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
FL3H_VITVI1.826e-1233.59Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
G2OX8_ARATH2.385e-1244.44Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
G2OX3_ARATH2.385e-1237.86Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]
GAO1B_WHEAT4.068e-1233.33Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834731 ID=CF834731; Name=CF834731; organism=Citrus sinensis; type=EST; length=666bp
TTTTTTTTTTTTTTTTTATGAGGCCAATATAATCTTATATAATTTCATCT
GAAACAGGAGGAATACAGTATTCCATTTGGTCACTTTCTACAATAAATAC
CTGAAACACCACGACCACCGTCGACTTTGACTCCACAAGAACTATGATCA
GTCCGAGCTTTCGGCTTATTTTAAAAACTATATATGTTCCACACTAGCCA
ACACAAACAACTCAGCTCTAACACCAAAGAGCCATAGGGGAACTCAAACA
GTTGCAATAGGACCCAGATTCACAATGGTCTCCATGTTCTTCATGGCTTC
AAACCTTGGCTCCTTGGCCTGAAACTTCAGCCCAGCATAGAGTTTCATGT
AATCCTCGAACACAAATTTCGGATAAACTTGGCTGTTCACAGCCTCCTTC
TCCACCAATGCTGGTGCCGGGTAGATCACAGCATCACTGCCTGGATTGTA
AAATGATGCTATGGACATCCTGTTACCCTCTGTTTGAGCAATCACGCGAT
GTAGCACACTCTTGTACTTGCCATTGGTTATCACCTCAAGTTGGTCACCG
AGGTTGATGACAATGGAGTGTTTCATGGGTGGAACATCAACCCATTGGTC
ATCTTTGAGCAGCTGGAGGCCACTGACTTCGTCATCTTGAAAGAGCAAGA
TGATGCCACCAGCATC
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