CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PLACH (Adenosylhomocysteinase OS=Plasmodium chabaudi GN=PC000295.02.0 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.794e-27
Identity = 64/113 (56.64%), Postives = 76/113 (67.26%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR   P  N  IIVLA+GRL+NL CATGHP+FVMS SF NQV AQLELW+ ++TGKYEK K Y+LPK LDEKV           LT L   Q +++ VS +GP+K   YRY
Sbjct:  368 QVDRVTLPNGNK-IIVLAQGRLLNLACATGHPAFVMSFSFCNQVFAQLELWENRNTGKYEKNKSYILPKELDEKVAYYHLKKLNATLTELDDNQCEFLGVSKNGPFKSEAYRY 479          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_MYXXD (Adenosylhomocysteinase OS=Myxococcus xanthus (strain DK 1622) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.794e-27
Identity = 66/113 (58.41%), Postives = 77/113 (68.14%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE-KKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+ N  II+LA+GRL+NLGC TGHPS+VMS SF NQ IAQ+EL+    +  YE  KVYVLPKHLDEKV           LT L++EQADYI V   GPYKP  YRY
Sbjct:  367 QVDHIIFPD-NKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQTIAQIELYSH--SANYEVGKVYVLPKHLDEKVARLQLKKLNAQLTELSQEQADYIGVKTSGPYKPDTYRY 476          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_JANMA (Adenosylhomocysteinase OS=Janthinobacterium sp. (strain Marseille) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.794e-27
Identity = 65/112 (58.04%), Postives = 74/112 (66.07%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    II+LAEGRL+NLGC TGHPS+VMS SF NQ IAQ+EL+   +T  Y   VY LPKHLDEKV           LT LT EQA+YI V   GPYKP HYRY
Sbjct:  371 QVDHIIFPD-GKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELY--ANTKNYPVGVYTLPKHLDEKVARLQLKKLNAQLTTLTTEQANYIGVQQTGPYKPEHYRY 479          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_COREF (Adenosylhomocysteinase OS=Corynebacterium efficiens GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.794e-27
Identity = 66/112 (58.93%), Postives = 78/112 (69.64%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D + FP   S IIVL+EGRL+NLG ATGHPSFVMS SF +Q IAQ+EL++ +  G+YE +VY LPK LDEKV           LT LTKEQA+YI V   GP+KP HYRY
Sbjct:  370 QVDEFTFPNGKS-IIVLSEGRLLNLGNATGHPSFVMSTSFADQTIAQIELFQNE--GQYENQVYRLPKILDEKVARIHVEALGGKLTELTKEQAEYIGVDVAGPFKPEHYRY 478          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_CHLPD (Adenosylhomocysteinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.794e-27
Identity = 66/112 (58.93%), Postives = 74/112 (66.07%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D++ F E    I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQLELW    T  Y   VY LPK LDE+V           LT LT EQA+YI V  +GPYKP HYRY
Sbjct:  365 QVDKYTF-EDGHAIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQLELW----TRDYAIDVYRLPKQLDEEVARLHLEQLGVKLTTLTNEQAEYIGVPLEGPYKPEHYRY 471          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_BURTA (Adenosylhomocysteinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.794e-27
Identity = 64/112 (57.14%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+     G+Y  KVYVLPKHLDEKV           L+ L+ +QA YI V   GP+KP HYRY
Sbjct:  365 QVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTR--GGEYANKVYVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVPKAGPFKPDHYRY 473          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RHIEC (Adenosylhomocysteinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.567e-27
Identity = 65/112 (58.04%), Postives = 79/112 (70.54%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +   G+YE KVY+LPKHLDEKV           LT+L++EQA YI V   GP+K  HYRY
Sbjct:  358 QVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTKP--GQYENKVYILPKHLDEKVARLHLDKLGVKLTQLSEEQAAYIGVKPQGPFKSDHYRY 466          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PELPB (Adenosylhomocysteinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.567e-27
Identity = 66/112 (58.93%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D++ F E  + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW    T  Y   VY LPK LDE+V           LTRL+ EQA YI V  DGPYKP HYRY
Sbjct:  365 QVDKYTF-ENGNCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW----TKDYAVGVYRLPKELDEEVARLHLEQLGVKLTRLSDEQAAYIGVPLDGPYKPEHYRY 471          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_LEIDO (Adenosylhomocysteinase OS=Leishmania donovani PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 7.567e-27
Identity = 63/116 (54.31%), Postives = 79/116 (68.10%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK----KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR+   E    II+LA+GRL+NLGCA+GHPSFVMS SFTNQV+AQ+ELW  +  GKY +     V+ LPK LDEKV           LT+LT +QA+YI+   +GP+KP HYRY
Sbjct:  323 QVDRYTM-ENGRHIILLAKGRLVNLGCASGHPSFVMSNSFTNQVLAQIELWSNRDNGKYPRGDKAGVFFLPKALDEKVAALHLAHVGAKLTKLTPKQAEYINCPVNGPFKPDHYRY 437          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_HERAR (Adenosylhomocysteinase OS=Herminiimonas arsenicoxydans GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.567e-27
Identity = 65/112 (58.04%), Postives = 74/112 (66.07%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    II+LAEGRL+NLGC TGHPS+VMS SF NQ IAQ+EL+   +T  Y   VY LPKHLDEKV           LT LT EQA+YI V   GPYKP HYRY
Sbjct:  371 QVDHIIFPD-GKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELY--ANTKNYPVGVYTLPKHLDEKVARLQLKKLNSQLTTLTDEQANYIGVQKAGPYKPEHYRY 479          
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_PLACH5.794e-2756.64Adenosylhomocysteinase OS=Plasmodium chabaudi GN=P... [more]
SAHH_MYXXD5.794e-2758.41Adenosylhomocysteinase OS=Myxococcus xanthus (stra... [more]
SAHH_JANMA5.794e-2758.04Adenosylhomocysteinase OS=Janthinobacterium sp. (s... [more]
SAHH_COREF5.794e-2758.93Adenosylhomocysteinase OS=Corynebacterium efficien... [more]
SAHH_CHLPD5.794e-2758.93Adenosylhomocysteinase OS=Chlorobium phaeobacteroi... [more]
SAHH_BURTA5.794e-2757.14Adenosylhomocysteinase OS=Burkholderia thailandens... [more]
SAHH_RHIEC7.567e-2758.04Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_PELPB7.567e-2758.93Adenosylhomocysteinase OS=Pelodictyon phaeoclathra... [more]
SAHH_LEIDO7.567e-2754.31Adenosylhomocysteinase OS=Leishmania donovani PE=3... [more]
SAHH_HERAR7.567e-2758.04Adenosylhomocysteinase OS=Herminiimonas arsenicoxy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
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