CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_CORGB (Adenosylhomocysteinase OS=Corynebacterium glutamicum (strain R) GN=ahcY PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.755e-26
Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D + F  T   IIVL+EGRL+NLG ATGHPSFVMS SF +Q IAQ+EL++ +  G+YE +VY LPK LDEKV           LT LTKEQA+YI V   GP+KP HYRY
Sbjct:  370 QVDEFTF-STGRSIIVLSEGRLLNLGNATGHPSFVMSNSFADQTIAQIELFQNE--GQYENEVYRLPKVLDEKVARIHVEALGGQLTELTKEQAEYIGVDVAGPFKPEHYRY 478          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_CAEEL (Adenosylhomocysteinase OS=Caenorhabditis elegans GN=ahcy-1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.755e-26
Identity = 63/113 (55.75%), Postives = 78/113 (69.03%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKST-GKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR+   +    +I+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW +  T  +Y+  +YVLPK LDE+V           LT+L+ EQA Y+ V   GPYKP HYRY
Sbjct:  326 QVDRYTL-KNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKLGLYVLPKTLDEEVAYLHLAQLGVKLTKLSDEQASYLGVPVAGPYKPDHYRY 437          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RHILO (Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+EL+ +    +Y+ +VYVLPKHLDEKV           LT L+ EQA YI V+  GP+KP HYRY
Sbjct:  358 QVDMITFPD-GKRMILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELFTKGE--QYQNQVYVLPKHLDEKVARLHLDKLGARLTELSGEQAAYIGVTPQGPFKPEHYRY 466          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_METS4 (Adenosylhomocysteinase OS=Methylobacterium sp. (strain 4-46) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26
Identity = 64/112 (57.14%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+ELW  +  GKYE +VY LPK LDEKV           LT L  +QA YI V A GP+KP HYRY
Sbjct:  360 QVDEIEFPDGHR-IILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELWTNQ--GKYENQVYTLPKTLDEKVAALHLEKIGVKLTTLRPDQAAYIGVQASGPFKPDHYRY 468          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_METPB (Adenosylhomocysteinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26
Identity = 60/99 (60.61%), Postives = 73/99 (73.74%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW   + GKYE++VY LPK LDEKV           L++L  +QA YI VS +GP+KP HYRY
Sbjct:  372 IILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELW--TNPGKYERQVYTLPKTLDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQNGPFKPEHYRY 468          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_FLAPJ (Adenosylhomocysteinase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26
Identity = 61/112 (54.46%), Postives = 74/112 (66.07%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D++        I++LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW  K++  Y   VY+LPKHLDEKV           L  L  +QA YI V  DGP+KP +YRY
Sbjct:  331 QVDKYTI--AGKDILILAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW--KNSAAYNNDVYMLPKHLDEKVAFLHLAKLGVELEVLRDDQAAYIGVGVDGPFKPEYYRY 438          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_DROME (Adenosylhomocysteinase OS=Drosophila melanogaster GN=Ahcy13 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26
Identity = 63/112 (56.25%), Postives = 79/112 (70.54%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR+   ++   II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW +  + KY   V+VLPK LDE+V           LT+LT++QA Y+ VS  GP+KP HYRY
Sbjct:  324 QVDRYTM-QSGKHIILLAEGRLVNLGCAHGHPSFVMSNSFTNQVLAQIELWTK--SDKYAVGVHVLPKILDEEVASLHLEKLGVKLTKLTEKQATYLGVSQTGPFKPDHYRY 432          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26
Identity = 60/99 (60.61%), Postives = 72/99 (72.73%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW   + GKYE++VY LPK LDEKV           L++L  +QA YI VS  GP+KP HYRY
Sbjct:  372 IILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELW--TNPGKYERQVYTLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY 468          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26
Identity = 60/99 (60.61%), Postives = 72/99 (72.73%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW   + GKYE++VY LPK LDEKV           L++L  +QA YI VS  GP+KP HYRY
Sbjct:  372 IILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELW--TNPGKYERQVYTLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY 468          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_CORDI (Adenosylhomocysteinase OS=Corynebacterium diphtheriae GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26
Identity = 63/112 (56.25%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D +  P   S I+VL+EGRL+NLG ATGHPSFVMS SF +Q IAQ+EL++  + G+Y  +VY LPK LDEKV           +T LTKEQA+YI V   GPYKP HYRY
Sbjct:  370 QVDEFTLPNGKS-IVVLSEGRLLNLGNATGHPSFVMSTSFADQTIAQIELFQ--NDGRYVNEVYRLPKILDEKVARIHVEALGGTITELTKEQAEYIGVDVAGPYKPEHYRY 478          
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_CORGB3.755e-2658.04Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_CAEEL3.755e-2655.75Adenosylhomocysteinase OS=Caenorhabditis elegans G... [more]
SAHH_RHILO4.905e-2656.25Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY P... [more]
SAHH_METS44.905e-2657.14Adenosylhomocysteinase OS=Methylobacterium sp. (st... [more]
SAHH_METPB4.905e-2660.61Adenosylhomocysteinase OS=Methylobacterium populi ... [more]
SAHH_FLAPJ4.905e-2654.46Adenosylhomocysteinase OS=Flavobacterium psychroph... [more]
SAHH_DROME6.405e-2656.25Adenosylhomocysteinase OS=Drosophila melanogaster ... [more]
SAHH_METEP8.366e-2660.61Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC48.366e-2660.61Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_CORDI8.366e-2656.25Adenosylhomocysteinase OS=Corynebacterium diphther... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
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