CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_BARHE (Adenosylhomocysteinase OS=Bartonella henselae GN=ahcY PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26
Identity = 64/112 (57.14%), Postives = 78/112 (69.64%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+EL+    +G Y+ +V VLPK+LDEKV           LT L++EQA YI V+  GPYKP HYRY
Sbjct:  357 QVDMITFPD-GKRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELFTR--SGHYKNEVTVLPKYLDEKVARLHLDQLGIKLTTLSQEQAAYIGVTPQGPYKPDHYRY 465          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_VARPS (Adenosylhomocysteinase OS=Variovorax paradoxus (strain S110) GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.093e-25
Identity = 66/112 (58.93%), Postives = 73/112 (65.18%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    II+LA+GRL+NLGC TGHPSFVMS SF NQ IAQ+EL+  K       KVYVLPKHLDEKV           LT LT EQA YI VS +GPYKP  YRY
Sbjct:  370 QVDHITFPDGKK-IILLAKGRLVNLGCGTGHPSFVMSSSFANQTIAQIELF-TKPDAYQAGKVYVLPKHLDEKVARLHLKKVGAMLTELTDEQAAYIGVSKNGPYKPDTYRY 479          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_MARMM (Adenosylhomocysteinase OS=Maricaulis maris (strain MCS10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.093e-25
Identity = 64/112 (57.14%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FPE +  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW +     Y  +VY+LPKHLDEKV           LT L+ EQADYI V   GP+K  HYRY
Sbjct:  361 QVDLVNFPEGHR-IILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTKGE--NYTNEVYILPKHLDEKVAALHLDKLGAKLTVLSDEQADYIGVPQHGPFKAEHYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.093e-25
Identity = 61/112 (54.46%), Postives = 74/112 (66.07%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    +I+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV           LT L  +QA YI V  +GP+K  HYRY
Sbjct:  363 QVDEITFPD-GKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELYANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRPDQAAYIGVKQEGPFKSDHYRY 473          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_SCHPO (Adenosylhomocysteinase OS=Schizosaccharomyces pombe GN=SPBC8D2.18c PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25
Identity = 60/112 (53.57%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR+   +    II+LA+GRL+NLGCATGHPSFVMSCSFTNQV+AQ+ LW + ++  Y   V++LPK LDE+V           LT LT  Q+DY+ +  DGPYK  HYRY
Sbjct:  325 QVDRYEL-KNGRHIILLADGRLVNLGCATGHPSFVMSCSFTNQVLAQIALWTDNTS--YPLGVHMLPKKLDEEVARLHLGKLGVKLTTLTSVQSDYLGIPVDGPYKADHYRY 433          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 63/112 (56.25%), Postives = 73/112 (65.18%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q   W FP+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV           LT L  EQA YI V  DGPYKP HYRY
Sbjct:  361 QVHTWKFPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQASYIGVEVDGPYKPDHYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RHILW (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +    +Y  +VY+LPKHLDEKV           LT+L++EQA YI VS  GP+K  HYRY
Sbjct:  358 QVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTKPD--QYSNQVYILPKHLDEKVARLHLDKLGVKLTQLSEEQAAYIGVSPKGPFKSDHYRY 466          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 67/112 (59.82%), Postives = 73/112 (65.18%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  VFP+    I +LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+  KS      KVYVLPKHLDEKV           LT LT EQA YI VS  GPYK   YRY
Sbjct:  368 QVDHVVFPDGKK-ITLLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELF-TKSADYQVGKVYVLPKHLDEKVARLHLKKVGAMLTELTDEQAAYIGVSKSGPYKADTYRY 477          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_METNO (Adenosylhomocysteinase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+ELW  +  GKY+++VY LPK LDEKV           LT+L  +QA YI VS +GP+KP HYRY
Sbjct:  372 IILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELWTNQ--GKYDRQVYTLPKALDEKVAALHLEKIGVKLTKLRPDQAAYIGVSENGPFKPDHYRY 468          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_GRABC (Adenosylhomocysteinase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 62/112 (55.36%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  VFP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW+ K        VY LPKHLDEKV           LT+L+ +QA+YI VS  GP+K   YRY
Sbjct:  330 QVDEVVFPD-GKRLIILSEGRLVNLGNATGHPSFVMSASFTNQVLAQIELWQAKPGQYLPNHVYTLPKHLDEKVAALHLAKVGAKLTKLSDKQAEYIGVSQAGPFKHDLYRY 440          
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_BARHE8.366e-2657.14Adenosylhomocysteinase OS=Bartonella henselae GN=a... [more]
SAHH_VARPS1.093e-2558.93Adenosylhomocysteinase OS=Variovorax paradoxus (st... [more]
SAHH_MARMM1.093e-2557.14Adenosylhomocysteinase OS=Maricaulis maris (strain... [more]
SAHH_BRASB1.093e-2554.46Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]
SAHH_SCHPO1.427e-2553.57Adenosylhomocysteinase OS=Schizosaccharomyces pomb... [more]
SAHH_STRAZ1.864e-2556.25Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_RHILW1.864e-2556.25Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_METPP1.864e-2559.82Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_METNO1.864e-2559.60Adenosylhomocysteinase OS=Methylobacterium nodulan... [more]
SAHH_GRABC1.864e-2555.36Adenosylhomocysteinase OS=Granulibacter bethesdens... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
back to top