CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_FLAJ1 (Adenosylhomocysteinase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            II+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW   ++  Y+ +VY+LPKHLDEKV           L  L ++QA YI V   GP+KP +YRY
Sbjct:  342 IIILAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW--NNSAAYKNEVYMLPKHLDEKVAALHLAKLGVELEVLREDQAAYIGVEVQGPFKPEYYRY 438          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_BOVIN (Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V           LT+LT++QA Y+ VS +GP+KP HYRY
Sbjct:  324 QVDRYLL-KNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGVSREGPFKPDHYRY 432          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHHB_XENLA (Adenosylhomocysteinase B OS=Xenopus laevis GN=ahcy-B PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW   +T KY   VY LPK LDE V           LT+LT +QA Y+ +  +GP+KP HYRY
Sbjct:  325 QVDRYLL-KNGRHIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELW--TNTDKYPVGVYFLPKKLDEAVAAAHLDKLGVKLTKLTDKQAKYLGLDKEGPFKPDHYRY 433          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHHA_XENLA (Adenosylhomocysteinase A OS=Xenopus laevis GN=ahcy-A PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25
Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW   +T KY   VY LPK LDE V           LT+LT +QA Y+ +  +GP+KP HYRY
Sbjct:  325 QVDRYLL-KNGRHIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELW--TNTDKYPVGVYFLPKKLDEAVAAAHLDKLGVKLTKLTDKQAKYLGLDKEGPFKPDHYRY 433          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RHIL3 (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25
Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +    +Y  +VY+LPKHLDEKV           LT L++EQA YI VS  GP+K  HYRY
Sbjct:  358 QVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTKPD--QYSNQVYILPKHLDEKVARLHLDKLGVKLTELSEEQAAYIGVSPKGPFKSDHYRY 466          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_HYPNA (Adenosylhomocysteinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25
Identity = 63/112 (56.25%), Postives = 74/112 (66.07%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL       +Y+ KVY LPKHLDEKV           LT+L+ EQA YI V   GP+KP HYRY
Sbjct:  361 QVDMITFPD-GKRIILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIEL--HLRGNEYDNKVYTLPKHLDEKVARLHLDKLGVQLTKLSGEQAAYIGVEQTGPFKPEHYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_LEPCP (Adenosylhomocysteinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25
Identity = 65/112 (58.04%), Postives = 74/112 (66.07%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+     G    KVYVLPKHLDEKV           LT LT +QA YI V  +GPYKP  YRY
Sbjct:  368 QVDHIIFPDGKK-IILLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELFCHPD-GYDVGKVYVLPKHLDEKVARLHLKKVGAMLTELTDDQAAYIGVPKNGPYKPDTYRY 477          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_AZOSE (Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25
Identity = 62/112 (55.36%), Postives = 72/112 (64.29%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+EL+    T  Y   VY LPKHLDEKV           LT L  +QA YI V  +GPYK  HYRY
Sbjct:  362 QVDHVIFPD-GKRIILLAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELFTR--TADYPVGVYTLPKHLDEKVARLQLKKLNAQLTELRPDQAAYIGVPVEGPYKSAHYRY 470          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PIG (Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25
Identity = 61/112 (54.46%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V           LT+LT++QA Y+ +S +GP+KP HYRY
Sbjct:  324 QVDRYLL-KNGHRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSREGPFKPDHYRY 432          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_HUMAN (Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=1 SV=4)

HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25
Identity = 62/112 (55.36%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR+   +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V           LT+LT++QA Y+ +S DGP+KP HYRY
Sbjct:  324 QVDRYRL-KNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 432          
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_FLAJ11.864e-2558.59Adenosylhomocysteinase OS=Flavobacterium johnsonia... [more]
SAHH_BOVIN1.864e-2555.36Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 ... [more]
SAHHB_XENLA1.864e-2555.36Adenosylhomocysteinase B OS=Xenopus laevis GN=ahcy... [more]
SAHHA_XENLA1.864e-2555.36Adenosylhomocysteinase A OS=Xenopus laevis GN=ahcy... [more]
SAHH_RHIL32.434e-2556.25Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_HYPNA2.434e-2556.25Adenosylhomocysteinase OS=Hyphomonas neptunium (st... [more]
SAHH_LEPCP3.179e-2558.04Adenosylhomocysteinase OS=Leptothrix cholodnii (st... [more]
SAHH_AZOSE3.179e-2555.36Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN... [more]
SAHH_PIG4.152e-2554.46Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 ... [more]
SAHH_HUMAN4.152e-2555.36Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
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