CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_STRFR (Adenosylhomocysteinase (Fragment) OS=Streptomyces fradiae GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.423e-25
Identity = 62/112 (55.36%), Postives = 73/112 (65.18%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q   W F +    IIVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV           LT L  EQA+YI V  +GPYKP HYRY
Sbjct:   12 QVHTWTFADGKK-IIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELYTKPE--QYPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQAEYIGVEVEGPYKPDHYRY 120          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_STRAA (Adenosylhomocysteinase OS=Streptomyces argillaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.423e-25
Identity = 63/112 (56.25%), Postives = 71/112 (63.39%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q   W FP+    IIVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +   G Y   VY LPKHLDEKV           LT L  EQA YI V  DGPYK  HYRY
Sbjct:  374 QVHTWTFPDGKK-IIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKP--GDYPTGVYTLPKHLDEKVARLHLDALGVKLTTLRPEQASYIGVDVDGPYKSDHYRY 482          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_MACFA (Adenosylhomocysteinase OS=Macaca fascicularis GN=AHCY PE=2 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 5.423e-25
Identity = 62/112 (55.36%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR+   +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V           LT+LT++QA Y+ +S DGP+KP HYRY
Sbjct:  324 QVDRYRL-KNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSRDGPFKPDHYRY 432          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_OCHA4 (Adenosylhomocysteinase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.082e-25
Identity = 63/112 (56.25%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    II+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPKHLDEKV           LT L++EQA YI V+  GP+K  HYRY
Sbjct:  358 QVDLIEFPD-GKRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 466          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_ANOGA (Adenosylhomocysteinase OS=Anopheles gambiae GN=Ahcy13 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.082e-25
Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR+     N  II+LAEGRL+NLGCA GH SFVMS SFTNQV+AQ+ELW  +   +Y   V+VLPK LDE+V           LT+L+  QA+Y+++ A+GPYKP HYRY
Sbjct:  324 QVDRYRLANGNH-IILLAEGRLVNLGCAMGHSSFVMSNSFTNQVLAQIELWTNRE--QYAIGVHVLPKKLDEEVAALHLDKLGVKLTKLSARQAEYLNLPAEGPYKPEHYRY 432          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_AGRRK (Adenosylhomocysteinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.082e-25
Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   F + N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +   G+Y+ +VYVLPKHLDEKV           LT L+ EQA YI V+  GP+K  HYRY
Sbjct:  358 QVDLIEFAKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTK--PGQYQNQVYVLPKHLDEKVARLHLGKLGVKLTELSGEQAAYIGVTPQGPFKSDHYRY 466          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_STRGG (Adenosylhomocysteinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.250e-25
Identity = 62/112 (55.36%), Postives = 72/112 (64.29%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q   W FP+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +     Y   VYVLPKHLDEKV           LT L  EQA YI V  +GPYKP HYRY
Sbjct:  377 QVHTWTFPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPED--YPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQAAYIGVEVEGPYKPDHYRY 485          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_SINMW (Adenosylhomocysteinase OS=Sinorhizobium medicae (strain WSM419) GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.250e-25
Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SF+NQV+AQ+EL+ +     Y+ +VYVLPK LDEKV           LT L++EQA YI V A GP+K  HYRY
Sbjct:  358 QVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFSNQVLAQIELFTKGE--NYKNEVYVLPKQLDEKVARLHLAKLGAKLTELSEEQAAYIGVKAQGPFKAEHYRY 466          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_STRCO (Adenosylhomocysteinase OS=Streptomyces coelicolor GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.208e-24
Identity = 61/112 (54.46%), Postives = 73/112 (65.18%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q   W +P+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV           LT L  EQADYI V  +GPYK  HYRY
Sbjct:  377 QVHTWTYPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDSLGVKLTTLRPEQADYIGVKVEGPYKADHYRY 485          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RHOSH (Adenosylhomocysteinase OS=Rhodobacter sphaeroides GN=ahcY PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.208e-24
Identity = 59/103 (57.28%), Postives = 72/103 (69.90%), Query Frame = -3
Query:  329 TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 637
            + S II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW + +   Y+  VY+LPK LDEKV           LT +  EQADYI V  +GP+K  HYRY
Sbjct:  363 SGSRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELWTKGA--DYQPGVYILPKALDEKVARLHLKKIGVKLTDVRPEQADYIGVKVEGPFKAEHYRY 463          
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_STRFR5.423e-2555.36Adenosylhomocysteinase (Fragment) OS=Streptomyces ... [more]
SAHH_STRAA5.423e-2556.25Adenosylhomocysteinase OS=Streptomyces argillaceus... [more]
SAHH_MACFA5.423e-2555.36Adenosylhomocysteinase OS=Macaca fascicularis GN=A... [more]
SAHH_OCHA47.082e-2556.25Adenosylhomocysteinase OS=Ochrobactrum anthropi (s... [more]
SAHH_ANOGA7.082e-2554.46Adenosylhomocysteinase OS=Anopheles gambiae GN=Ahc... [more]
SAHH_AGRRK7.082e-2556.25Adenosylhomocysteinase OS=Agrobacterium radiobacte... [more]
SAHH_STRGG9.250e-2555.36Adenosylhomocysteinase OS=Streptomyces griseus sub... [more]
SAHH_SINMW9.250e-2556.25Adenosylhomocysteinase OS=Sinorhizobium medicae (s... [more]
SAHH_STRCO1.208e-2454.46Adenosylhomocysteinase OS=Streptomyces coelicolor ... [more]
SAHH_RHOSH1.208e-2457.28Adenosylhomocysteinase OS=Rhodobacter sphaeroides ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
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