CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_DIAST (Adenosylhomocysteinase OS=Diaphorobacter sp. (strain TPSY) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.578e-24
Identity = 64/112 (57.14%), Postives = 72/112 (64.29%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    II+LA+GRL+NLGC TGHPSFVMS SF NQ IAQ+EL+     G    KVYVLPKHLDEKV           LT L+ EQA YI V   GPYKP  YRY
Sbjct:  367 QVDHVIFPD-GKRIILLAKGRLVNLGCGTGHPSFVMSNSFANQTIAQIELFTHPE-GYDVGKVYVLPKHLDEKVARLHLKKVGAMLTELSDEQAAYIGVPKQGPYKPDTYRY 476          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_BDEBA (Adenosylhomocysteinase OS=Bdellovibrio bacteriovorus GN=ahcY PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.578e-24
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            +I+LA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+  +   KY+   VY LPKHLDEKV           LT+L+ +QA Y+ +S  GP+KP HYRY
Sbjct:  363 VIILAKGRLVNLGCATGHPSFVMSNSFTNQVLAQMELFNNRD--KYQDIAVYRLPKHLDEKVAALHLDKLGVKLTKLSSKQAKYLHMSPQGPFKPEHYRY 460          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_ACISJ (Adenosylhomocysteinase OS=Acidovorax sp. (strain JS42) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.578e-24
Identity = 64/112 (57.14%), Postives = 72/112 (64.29%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    II+LA+GRL+NLGC TGHPSFVMS SF NQ IAQ+EL+     G    KVYVLPKHLDEKV           LT L+ EQA YI V   GPYKP  YRY
Sbjct:  367 QVDHVIFPD-GKRIILLAKGRLVNLGCGTGHPSFVMSNSFANQTIAQIELFTHPE-GYDVGKVYVLPKHLDEKVARLHLKKVGAMLTELSDEQAAYIGVPKQGPYKPDTYRY 476          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_BART1 (Adenosylhomocysteinase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.061e-24
Identity = 63/112 (56.25%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+EL+       Y  +V VLPK+LDEKV           LT L++EQA YI V+  GPYKP HYRY
Sbjct:  357 QVDMITFPD-GKRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELFTRAE--HYTNEVTVLPKNLDEKVARLHLDRLGIKLTVLSEEQAAYIGVTPQGPYKPNHYRY 465          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RHOCA (Adenosylhomocysteinase OS=Rhodobacter capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.691e-24
Identity = 57/99 (57.58%), Postives = 72/99 (72.73%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW + +  +Y+  VY+LPK LDEKV           LT L  +QA+YI V+ +GP+K  HYRY
Sbjct:  367 IILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELWTKGA--EYQPGVYILPKSLDEKVARLHLKKIGVKLTTLRPDQAEYIGVTVEGPFKSDHYRY 463          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RAT (Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 2.691e-24
Identity = 60/112 (53.57%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V           LT+LT++QA Y+ +  +GP+KP HYRY
Sbjct:  324 QVDRYLL-KNGHRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFKPDHYRY 432          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_DELAS (Adenosylhomocysteinase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.515e-24
Identity = 66/113 (58.41%), Postives = 73/113 (64.60%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE-KKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+ +     YE  KVYVLPK LDEKV           LT LT  QA YI VS  GPYKP  YRY
Sbjct:  367 QVDHITFPDGKK-IILLAKGRLVNLGCATGHPSFVMSASFANQTIAQIELFTKPDA--YEVGKVYVLPKILDEKVARLHLKKVGAMLTELTDGQAAYIGVSKQGPYKPETYRY 476          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_MOUSE (Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 5.995e-24
Identity = 60/112 (53.57%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR+ + +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V           LT+LT++QA Y+ +  +GP+KP HYRY
Sbjct:  324 QVDRY-WLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFKPDHYRY 432          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_BARQU (Adenosylhomocysteinase OS=Bartonella quintana GN=ahcY PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.023e-23
Identity = 62/112 (55.36%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+EL+       Y+ +V VLPK LDEKV           L+ L++EQA YI V+  GPYKP HYRY
Sbjct:  357 QVDIVTFPD-GKRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELFTRAE--HYKNEVTVLPKRLDEKVARLHLDRLGVKLSVLSEEQAVYIGVTPQGPYKPNHYRY 465          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_STRAW (Adenosylhomocysteinase OS=Streptomyces avermitilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.278e-23
Identity = 60/112 (53.57%), Postives = 72/112 (64.29%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q   W FP+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV           LT L  EQA YI V  +GP+K  HYRY
Sbjct:  377 QVHTWKFPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDSLGVKLTTLRPEQAAYIGVEVEGPFKSDHYRY 485          
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_DIAST1.578e-2457.14Adenosylhomocysteinase OS=Diaphorobacter sp. (stra... [more]
SAHH_BDEBA1.578e-2458.00Adenosylhomocysteinase OS=Bdellovibrio bacteriovor... [more]
SAHH_ACISJ1.578e-2457.14Adenosylhomocysteinase OS=Acidovorax sp. (strain J... [more]
SAHH_BART12.061e-2456.25Adenosylhomocysteinase OS=Bartonella tribocorum (s... [more]
SAHH_RHOCA2.691e-2457.58Adenosylhomocysteinase OS=Rhodobacter capsulatus G... [more]
SAHH_RAT2.691e-2453.57Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahc... [more]
SAHH_DELAS3.515e-2458.41Adenosylhomocysteinase OS=Delftia acidovorans (str... [more]
SAHH_MOUSE5.995e-2453.57Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=... [more]
SAHH_BARQU1.023e-2355.36Adenosylhomocysteinase OS=Bartonella quintana GN=a... [more]
SAHH_STRAW2.278e-2353.57Adenosylhomocysteinase OS=Streptomyces avermitilis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
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