CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAC (Adenosylhomocysteinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.131e-22
Identity = 62/112 (55.36%), Postives = 70/112 (62.50%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    I +LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+  K       KVYVLPK LDEKV           LT LT  QA YI V  +GPYK   YRY
Sbjct:  366 QVDHVIFPD-GKRITLLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELF-TKPDAYQAGKVYVLPKVLDEKVARLHLKKVGAQLTELTDAQAAYIGVKKEGPYKADTYRY 475          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_YEAST (Adenosylhomocysteinase OS=Saccharomyces cerevisiae GN=SAH1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.929e-22
Identity = 57/124 (45.97%), Postives = 78/124 (62.90%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKE------------KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR++   +   +I+LA GRL+NLGCATGH SFVMSCSF+NQV+AQ+ L+K             + TG +E  V+VLPK LDE V           LT+L+K Q++Y+ +  +GP+K  HYRY
Sbjct:  327 QVDRYLL-SSGRHVILLANGRLVNLGCATGHSSFVMSCSFSNQVLAQIALFKSNDKSFREKHIEFQKTGPFEVGVHVLPKILDEAVAKFHLGNLGVRLTKLSKVQSEYLGIPEEGPFKADHYRY 449          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PNECA (Adenosylhomocysteinase (Fragment) OS=Pneumocystis carinii GN=SAHH PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.297e-22
Identity = 59/112 (52.68%), Postives = 73/112 (65.18%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR++     + II+LAEGRL+NLGCATGH S VMS SFTNQV+AQ+ LW  +  G+Y   V+ LPK LDE+V           LT LT EQ+ Y+ +  DGPYK  HYRY
Sbjct:  332 QVDRYLLGNGRN-IILLAEGRLVNLGCATGHSSMVMSMSFTNQVLAQIALWTAQE-GQYPLGVHFLPKKLDEEV-ARLHLSKLGKLTSLTPEQSAYLDIPIDGPYKSEHYRY 440          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_DICDI (Adenosylhomocysteinase OS=Dictyostelium discoideum GN=sahA PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22
Identity = 58/112 (51.79%), Postives = 72/112 (64.29%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR+        II+LAEGRL+NLGC TGHPSFVMS SF NQ +AQ+ LW +  T +Y   V+ LPK LDE+V           LT LT++Q++Y+SV   GPYK  HYRY
Sbjct:  323 QVDRYTLAN-GVHIILLAEGRLVNLGCGTGHPSFVMSNSFCNQTLAQIALWTK--TEEYPLGVHFLPKILDEEVARLHLDQLGAKLTTLTEKQSEYLSVPVAGPYKVDHYRY 431          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPG (Adenosylhomocysteinase OS=Pseudomonas putida (strain GB-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.103e-21
Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = -3
Query:  329 PETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG-KYEKK-----VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 643
            P+ +  +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K      EKK     V VLPK LDE+V           +T+LTK+QADYI V+ +GP+KP  YRY
Sbjct:  359 PQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKYADLSAEKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKQQADYIGVTVEGPFKPHAYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_CANAL (Adenosylhomocysteinase OS=Candida albicans GN=SAH1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.058e-20
Identity = 57/124 (45.97%), Postives = 78/124 (62.90%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLEL-------WKEK-----STGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR++  +    +I+LA+GRL+NLGCATGH SFVMSCSF+NQV+AQ+ L       ++EK      TG ++  V++LPK LDE V           LT LT+ QA+Y+ +  +GPYK   YRY
Sbjct:  328 QVDRYLM-KNGRHVILLADGRLVNLGCATGHSSFVMSCSFSNQVLAQIALFNADNKEFREKFPEFAKTGPFDVGVHLLPKVLDETVARCHLDHLGAKLTTLTETQAEYLGIPEEGPYKADIYRY 450          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEP1 (Adenosylhomocysteinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ahcY PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.382e-20
Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = -3
Query:  329 PETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG-KYEKK-----VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 643
            P+ +  +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K      EKK     V VLPK LDE+V           +T+LTK+QADYI V+ +GP+KP  YRY
Sbjct:  359 PQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKFADLPAEKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQADYIGVTVEGPFKPHAYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPW (Adenosylhomocysteinase OS=Pseudomonas putida (strain W619) GN=ahcY PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.358e-20
Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = -3
Query:  329 PETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG-KYEKK-----VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 643
            P+ +  +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K      EKK     V VLPK LDE+V           +T+LT++QADYI V+ +GP+KP  YRY
Sbjct:  359 PQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKFADLSAEKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTQQQADYIGVTVEGPFKPHAYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU5 (Adenosylhomocysteinase OS=Pseudomonas stutzeri (strain A1501) GN=ahcY PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.860e-20
Identity = 54/118 (45.76%), Postives = 73/118 (61.86%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK------STGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            +T + V P  +  +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ EK      +       V VLPK LDE+V           +T+LT +QA+YI V+ +GP+KP  YRY
Sbjct:  351 RTGKTVDPTNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLYNEKFADLPVAEKTQNVTVMVLPKKLDEEVALEMVKGFGGVVTQLTAKQAEYIGVAVEGPFKPDSYRY 468          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPF (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.860e-20
Identity = 55/111 (49.55%), Postives = 73/111 (65.77%), Query Frame = -3
Query:  329 PETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 643
            P+ +  +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V           +T+LTK+QADYI V+ +GP+KP  YRY
Sbjct:  359 PQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQADYIGVTVEGPFKPHAYRY 469          
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_ACIAC1.131e-2255.36Adenosylhomocysteinase OS=Acidovorax avenae subsp.... [more]
SAHH_YEAST1.929e-2245.97Adenosylhomocysteinase OS=Saccharomyces cerevisiae... [more]
SAHH_PNECA4.297e-2252.68Adenosylhomocysteinase (Fragment) OS=Pneumocystis ... [more]
SAHH_DICDI5.611e-2251.79Adenosylhomocysteinase OS=Dictyostelium discoideum... [more]
SAHH_PSEPG8.103e-2150.45Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]
SAHH_CANAL1.058e-2045.97Adenosylhomocysteinase OS=Candida albicans GN=SAH1... [more]
SAHH_PSEP11.382e-2050.45Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]
SAHH_PSEPW2.358e-2049.55Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]
SAHH_PSEU56.860e-2045.76Adenosylhomocysteinase OS=Pseudomonas stutzeri (st... [more]
SAHH_PSEPF6.860e-2049.55Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
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