CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEMY (Adenosylhomocysteinase OS=Pseudomonas mendocina (strain ymp) GN=ahcY PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.170e-19
Identity = 55/111 (49.55%), Postives = 73/111 (65.77%), Query Frame = -3
Query:  329 PETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG-KYEKK-----VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 643
            P  +  +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K      EKK     V VLPK LDE+V           +T+LTK+QA+YI V+ +GP+KP  YRY
Sbjct:  359 PTNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKFADLPAEKKAERLTVEVLPKKLDEEVALEMVKGFGGVVTQLTKQQAEYIGVTVEGPFKPDTYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSE14 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.607e-19
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKK------VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K       K      V VLPK LDE+V           +T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  365 LILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKYADLAPAKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPHAYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU2 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ahcY PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.404e-19
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKK------VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K       K      V VLPK LDE+V           +T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  365 LILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKYADLAPAKKSERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPDAYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEE4 (Adenosylhomocysteinase OS=Pseudomonas entomophila (strain L48) GN=ahcY PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.404e-19
Identity = 53/111 (47.75%), Postives = 74/111 (66.67%), Query Frame = -3
Query:  329 PETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 643
            P+ +  +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K E+  V VLPK LDE+V           +T+LT +QA+YI V+ +GP+KP  YRY
Sbjct:  359 PQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKFAELPAAKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTPQQAEYIGVTVEGPFKPDAYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSESM (Adenosylhomocysteinase OS=Pseudomonas syringae pv. tomato GN=ahcY PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.807e-19
Identity = 53/105 (50.48%), Postives = 67/105 (63.81%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKK------VYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K       K      V VLPK LDE+V           +T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  365 LILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFDQKYADLAPAKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPDAYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEFS (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain SBW25) GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.905e-19
Identity = 54/105 (51.43%), Postives = 69/105 (65.71%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V           +T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  365 LILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKTQADYIGVTVEGPFKPHAYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAE (Adenosylhomocysteinase OS=Pseudomonas aeruginosa GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18
Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V           +T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  365 LILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAB (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18
Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V           +T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  365 LILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEA8 (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain LESB58) GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18
Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V           +T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  365 LILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PSEF5 (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ahcY PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.690e-18
Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = -3
Query:  329 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 625
            +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V           +T+LTK+QA+YI V+ +GP+KP  YRY
Sbjct:  365 LILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQAEYIGVTVEGPFKPDAYRY 469          
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_PSEMY1.170e-1949.55Adenosylhomocysteinase OS=Pseudomonas mendocina (s... [more]
SAHH_PSE142.607e-1950.48Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEU23.404e-1950.48Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEE43.404e-1947.75Adenosylhomocysteinase OS=Pseudomonas entomophila ... [more]
SAHH_PSESM5.807e-1950.48Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEFS9.905e-1951.43Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSEAE1.294e-1849.52Adenosylhomocysteinase OS=Pseudomonas aeruginosa G... [more]
SAHH_PSEAB1.294e-1849.52Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEA81.294e-1849.52Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEF51.690e-1850.48Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
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