CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.924e-30
Identity = 68/112 (60.71%), Postives = 83/112 (74.11%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D+  +P+    I VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+  ++ +YE KVYVLPK LDEKV           LTR+T++QADY+ V  DGPYKP HYRY
Sbjct:  367 QVDQIEWPD-GKRITVLAKGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQ--NSDRYENKVYVLPKQLDEKVARLHLANLGVKLTRMTEKQADYLGVPVDGPYKPEHYRY 475
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RALME (Adenosylhomocysteinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.513e-30
Identity = 67/112 (59.82%), Postives = 78/112 (69.64%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E+ +GKY   VYVLPKHLDEKV           LT LT++QA YI V  +GPYK  HYRY
Sbjct:  362 QVDHVKFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWAERDSGKYPVGVYVLPKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.513e-30
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D++ FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP +YRY
Sbjct:  330 QVDKYTFPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.513e-30
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D++ FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP +YRY
Sbjct:  330 QVDKYTFPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RALEJ (Adenosylhomocysteinase OS=Ralstonia eutropha (strain JMP134) GN=ahcY PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.287e-30
Identity = 66/112 (58.93%), Postives = 78/112 (69.64%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW+E+ +GKY   VY LPKHLDEKV           LT LT++QA YI V  +GPYK  HYRY
Sbjct:  362 QVDHVKFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTLPKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLE (Adenosylhomocysteinase OS=Mycobacterium leprae GN=ahcY PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.287e-30
Identity = 65/112 (58.04%), Postives = 78/112 (69.64%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D W F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  383 QVDLWTFGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.287e-30
Identity = 65/112 (58.04%), Postives = 78/112 (69.64%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D W F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  383 QVDLWTFGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_HALHL (Adenosylhomocysteinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.287e-30
Identity = 71/112 (63.39%), Postives = 81/112 (72.32%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    I +LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   + GKYEK VYVLPKHLDEKV           LTRL++EQA YI VS DGP+KP  YRY
Sbjct:  322 QVDHVEFPDGKK-ITLLAEGRLVNLGCATGHPSFVMSNSFTNQVMAQMELYN--NPGKYEKDVYVLPKHLDEKVAALHLGRVGANLTRLSEEQAGYIGVSVDGPFKPEWYRY 430
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PROMP (Adenosylhomocysteinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.598e-30
Identity = 69/112 (61.61%), Postives = 82/112 (73.21%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +  + +Y K+VYVLPKHLDE V           LT+LTK+QADYI+VS +GPYKP  YRY
Sbjct:  364 QVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNK--SDEYSKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKDQADYINVSVEGPYKPEQYRY 472
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_CHRVO (Adenosylhomocysteinase OS=Chromobacterium violaceum GN=ahcY PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.598e-30
Identity = 70/112 (62.50%), Postives = 80/112 (71.43%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+      KYEKKVYVLPKHLDEKV           LT L+ +QA YISV   GPYKP HYRY
Sbjct:  358 QVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFANGH--KYEKKVYVLPKHLDEKVARLHLARIGARLTELSDQQAAYISVPKQGPYKPDHYRY 466
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_PELCD1.924e-3060.71Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]
SAHH_RALME2.513e-3059.82Adenosylhomocysteinase OS=Ralstonia metallidurans ... [more]
SAHH_LEPBL2.513e-3059.82Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ2.513e-3059.82Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_RALEJ4.287e-3058.93Adenosylhomocysteinase OS=Ralstonia eutropha (stra... [more]
SAHH_MYCLE4.287e-3058.04Adenosylhomocysteinase OS=Mycobacterium leprae GN=... [more]
SAHH_MYCLB4.287e-3058.04Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]
SAHH_HALHL4.287e-3063.39Adenosylhomocysteinase OS=Halorhodospira halophila... [more]
SAHH_PROMP5.598e-3061.61Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_CHRVO5.598e-3062.50Adenosylhomocysteinase OS=Chromobacterium violaceu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
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