CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.127e-29
Identity = 69/112 (61.61%), Postives = 81/112 (72.32%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + S  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  368 QVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGS--EYGKEVYVLPKHLDEMVARLHLEKIGCKLTELSKDQADYINVPVEGPYKPDHYRY 476
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_PROMM (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.779e-29
Identity = 69/112 (61.61%), Postives = 79/112 (70.54%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y  +VYVLPKHLDE V           LT LTK+QADYISV  +GPYKP HYRY
Sbjct:  368 QVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFSKGD--QYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPVEGPYKPDHYRY 476
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSS (Adenosylhomocysteinase OS=Mycobacterium sp. (strain MCS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.779e-29
Identity = 66/112 (58.93%), Postives = 81/112 (72.32%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D W F + +S I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV           LT+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  381 QVDEWTFDDGHS-IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSK (Adenosylhomocysteinase OS=Mycobacterium sp. (strain KMS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.779e-29
Identity = 66/112 (58.93%), Postives = 81/112 (72.32%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D W F + +S I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV           LT+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  381 QVDEWTFDDGHS-IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_CHLP8 (Adenosylhomocysteinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.779e-29
Identity = 68/112 (60.71%), Postives = 78/112 (69.64%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D++VF E    I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELWK      Y+  VY LPKHLDE+V           LT L+KEQADYI V  +GPYKP HYRY
Sbjct:  365 QVDKYVF-EDGRCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWK----NNYDVDVYRLPKHLDEEVARLHLGQIGVKLTTLSKEQADYIGVPVEGPYKPEHYRY 471
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.629e-29
Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  368 QVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTK--ANEYGKEVYVLPKHLDEMVARLHLSKIGANLTELSKDQADYINVPVEGPYKPDHYRY 476
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.629e-29
Identity = 69/112 (61.61%), Postives = 77/112 (68.75%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY+LPK LDE+V           LT LTKEQADYI V  DGPYKP HYRY
Sbjct:  372 QVDKWTLKSGRS-IIVLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIEL---ATNPDLERKVYILPKKLDEQVARLHLARLGVTLTTLTKEQADYIGVPVDGPYKPGHYRY 479
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_BACTN (Adenosylhomocysteinase OS=Bacteroides thetaiotaomicron GN=ahcY PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.629e-29
Identity = 68/112 (60.71%), Postives = 81/112 (72.32%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q DR+ FP+ +S I++LA+GRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ +    KYE  VY LPKHLDE+V           LT+LT EQA YI VS DGPYK  HYRY
Sbjct:  370 QVDRYYFPDGHS-ILLLADGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFNK----KYEVNVYRLPKHLDEEVARLHLEKIGVKLTKLTPEQAAYIGVSVDGPYKAEHYRY 476
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_POLNS (Adenosylhomocysteinase OS=Polynucleobacter necessarius (strain STIR1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.739e-29
Identity = 66/116 (56.90%), Postives = 75/116 (64.66%), Query Frame = -3 
Query:  329 QTDRWVFPETNS----GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP  N      II+LA+GRL+NLGC TGHPS+VMS SF NQVIAQ+ELW    T KY   VY LPKHLDEKV           LT LT +QA YI V+ +GPYK  HYRY
Sbjct:  366 QVDHVIFPAANGMPEKRIIILAKGRLVNLGCGTGHPSYVMSSSFANQVIAQIELWNAVGTNKYPVGVYTLPKHLDEKVARLQLKKLNAQLTELTDQQAAYIGVTKEGPYKADHYRY 481
[Close]
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.190e-29
Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = -3 
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  368 QVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGD--EYAKEVYVLPKHLDEMVARLHLGRIGANLTELSKDQADYINVPVEGPYKPDHYRY 476
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_SYNS32.127e-2961.61Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_PROMM2.779e-2961.61Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_MYCSS2.779e-2958.93Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSK2.779e-2958.93Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_CHLP82.779e-2960.71Adenosylhomocysteinase OS=Chlorobaculum parvum (st... [more]
SAHH_SYNS93.629e-2960.71Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_DESVM3.629e-2961.61Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_BACTN3.629e-2960.71Adenosylhomocysteinase OS=Bacteroides thetaiotaomi... [more]
SAHH_POLNS4.739e-2956.90Adenosylhomocysteinase OS=Polynucleobacter necessa... [more]
SAHH_SYNSC6.190e-2960.71Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
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