CF834742

Overview
NameCF834742
Unique NameCF834742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.801e-28
Identity = 67/112 (59.82%), Postives = 81/112 (72.32%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GP+KP HYRY
Sbjct:  368 QVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPFKPDHYRY 476          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_DESVV (Adenosylhomocysteinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.801e-28
Identity = 67/112 (59.82%), Postives = 78/112 (69.64%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V           LTRL+K+QADYI VS +GP+KP HYRY
Sbjct:  372 QVDKWTLRSGRS-IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_DESVH (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.801e-28
Identity = 67/112 (59.82%), Postives = 78/112 (69.64%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V           LTRL+K+QADYI VS +GP+KP HYRY
Sbjct:  372 QVDKWTLRSGRS-IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_BURPP (Adenosylhomocysteinase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.801e-28
Identity = 66/112 (58.93%), Postives = 79/112 (70.54%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ +    KYE KVYVLPKHLDEKV           LT L+ +QA YI V  +GP+KP HYRY
Sbjct:  365 QVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTQGE--KYENKVYVLPKHLDEKVARLHLARIGANLTVLSDDQAGYIGVDKNGPFKPNHYRY 473          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.352e-28
Identity = 67/114 (58.77%), Postives = 77/114 (67.54%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKE--KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E  K + KY   VY LPKHLDEKV           LT LT +QA YI VS +GPYK  HYRY
Sbjct:  362 QVDHVIFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAQKGSSKYPVGVYTLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY 474          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_POLSQ (Adenosylhomocysteinase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.072e-28
Identity = 65/116 (56.03%), Postives = 75/116 (64.66%), Query Frame = -3
Query:  329 QTDRWVFPETNSG----IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  +FP  N      II+LA+GRL+NLGC TGHPS+VMS SF NQVIAQ+ELW    T KY   VY LPKHLDEKV           LT L+ +QA YI V+ +GPYK  HYRY
Sbjct:  366 QVDHVIFPAANGKPEKRIIILAKGRLVNLGCGTGHPSYVMSSSFANQVIAQIELWNAVGTDKYPIGVYTLPKHLDEKVARLQLKTLNAELTVLSDQQASYIGVTKEGPYKADHYRY 481          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.072e-28
Identity = 69/112 (61.61%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D  V P     II+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+   +  KYE KVYVLPKHLDEKV           LT L+ EQA YI V  +GPYKP HYRY
Sbjct:  364 QVDHIVLPNGRR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFCHGA--KYENKVYVLPKHLDEKVARLHLKKIGARLTELSDEQAAYIGVPKEGPYKPDHYRY 472          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.072e-28
Identity = 67/112 (59.82%), Postives = 78/112 (69.64%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D++VF E  + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW+      Y+  VY LPK LDE+V           LT LTKEQADYI V  +GPYKP HYRY
Sbjct:  365 QVDKYVF-ENGNCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQ----NDYKVGVYRLPKKLDEEVARLHLGQIGAKLTTLTKEQADYIGVPVEGPYKPEHYRY 471          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.012e-28
Identity = 65/112 (58.04%), Postives = 80/112 (71.43%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D+ +FP+    ++VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  330 QVDQVIFPD-GKRLMVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CF834742 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.240e-28
Identity = 64/112 (57.14%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  329 QTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 664
            Q D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV           LT L K+QADYI V  +GP+K  HYRY
Sbjct:  361 QVDEITFPD-GKRMILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 471          
The following BLAST results are available for this feature:
BLAST of CF834742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_SYNPW1.801e-2859.82Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_DESVV1.801e-2859.82Adenosylhomocysteinase OS=Desulfovibrio vulgaris s... [more]
SAHH_DESVH1.801e-2859.82Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_BURPP1.801e-2858.93Adenosylhomocysteinase OS=Burkholderia phytofirman... [more]
SAHH_RALSO2.352e-2858.77Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]
SAHH_POLSQ3.072e-2856.03Adenosylhomocysteinase OS=Polynucleobacter sp. (st... [more]
SAHH_METCA3.072e-2861.61Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_CHLTE3.072e-2859.82Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]
SAHH_COXB14.012e-2858.04Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_RHOPS5.240e-2857.14Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834742 ID=CF834742; Name=CF834742; organism=Citrus sinensis; type=EST; length=666bp
GTTTTTTTTTCTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTG
TAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAG
CCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCT
CATCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTG
CTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGA
ACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGA
GACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACC
CACCTATCAGTTTGGG
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