CF834747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA7_RAT (Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.308e-17 Identity = 50/147 (34.01%), Postives = 79/147 (53.74%), Query Frame = -2 Query: 329 KMYKIDDHVACA------VAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 745 K+ +DD+V A V+G+ +DA I+IN ARV+ Q + +P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y DD + ++L +K L + + S Sbjct: 61 KICALDDNVCMAFAVVASVSGLTADARIVINRARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQS 207
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA2_HALMA (Proteasome subunit alpha 2 OS=Haloarcula marismortui GN=psmA2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.014e-17 Identity = 53/152 (34.87%), Postives = 86/152 (56.58%), Query Frame = -2 Query: 290 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 745 K+++ID HV A AG ++DA LI+ AR Q+Q Y EP VE L + + D Q YTQ GG RPFGV+ L AG + +L+ +DPSG W+ Q+ L+++Y + + E ++LAL+ L+ +++ L + +++A + Sbjct: 67 KIHEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQYTQTGGARPFGVALLVAGIEDGEP-RLFETDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGMDLEGGIELALRALA-SVNEDGLDATGVDIATI 216
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.142e-17 Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = -2 Query: 332 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMD 745 K++K DDH+ A AG ++DA LI+ AR QAQ Y EP+ VE L + + D Q YTQ GG RPFGV+ + G N +L+ +DPSG WK + L++ Y + + +E V LAL L+ D Sbjct: 68 KIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFGVALIIGG-IVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGMDLDEGVDLALAALASVND 204
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.142e-17 Identity = 55/178 (30.90%), Postives = 92/178 (51.69%), Query Frame = -2 Query: 218 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVK 745 K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ RPFG+S L G+D + +LY +DPSG Y WK + +++Y D+ + ++L +K L + + S +ELA +M + + SPE + K + + Sbjct: 61 KICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVVQS---GGKNIELA---VMRRDQPLKILTSPEEIEKYVAE 232
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA1_DICDI (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum GN=psmA1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.715e-17 Identity = 47/145 (32.41%), Postives = 82/145 (56.55%), Query Frame = -2 Query: 317 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYK--DDISREEAVQLALKVLSKTMDSTSLT 745 K++ +DDHV A++G+ +DA +L N R + Y Y Y+ M VE+LV + D Q +TQ G RP+GV L AG+D+ G +Y + PSGN+ +K ++ L++ ++ ++ + E+ + L+ L +T+ +T T Sbjct: 62 KIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHTQRYGRRPYGVGLLVAGYDQ-LGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFEECTLEQLITHGLRALRETIPNTDDT 205
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA5_ENTHI (Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16 Identity = 58/179 (32.40%), Postives = 95/179 (53.07%), Query Frame = -2 Query: 224 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG-----LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 745 K+ +IDDH+ AV+G+ +DA LI+ AR++AQ + + Y EP+ VE + Q++ D + + RPFGV+ L AG D+ G +L+ +DPSG + + QSIL + Y ++ EA LAL L + M+ L S +E+A L+ K K+++ + L+ Sbjct: 66 KIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDET-GPRLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNKSMTLREAEILALSTLKQVMEE-KLNSKNVEVA---LVTVEKKKFEIMDTAFIENLI 239
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA73_DROVI (Proteasome subunit alpha type-7-1B OS=Drosophila virilis GN=Pros28.1B PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.333e-16 Identity = 57/175 (32.57%), Postives = 85/175 (48.57%), Query Frame = -2 Query: 224 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV-FLMPSGKVKYQVCSPEALSKLL 745 K+ KID H+A AG+ +DA +L++ A+V+AQ + + P VE + + L KQ YTQ RPFGVS L G+D++ +L+ +DPSG Y W L+++ +A V+ +TSL +ELA + + P VK PE L LL Sbjct: 60 KIKKIDQHMAMTFAGLTADARVLVSRAQVEAQSHRLNFDRPASVEYITRYLARLKQTYTQSVARRPFGVSCLIGGFDEDGRPRLFQTDPSGIYYEWSANTTGRLGQTVNEYLEKNTAAISRTPDAASAMKHVVRALFTATSLDPASIELAVLRYWQPIEMVK-----PETLEYLL 229
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.333e-16 Identity = 52/153 (33.99%), Postives = 79/153 (51.63%), Query Frame = -2 Query: 290 KMYKIDDHVACAVAGIMSDANILINTAR-VQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 745 K+ I ++ +G+ D +L++ AR V Y Y E P LVQ + Q TQ GG+RP+GVS L AGWD+ G LY DPSG+Y WK ++ L++ Y + + E+AV +AL L +T++ + D +E+ V Sbjct: 63 KISLITPNIGMVYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSGGVRPYGVSLLIAGWDEG-GPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLELEDAVHIALLTLKETIEG-EMNGDTIEIGIV 213
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.353e-16 Identity = 50/161 (31.06%), Postives = 88/161 (54.66%), Query Frame = -2 Query: 269 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 745 K+ +D+HV A AG+ +DA I+IN A+V+ Q + ++P+ +E + + + KQ YTQ G RPFG+S L G+D + L+ ++PSG + +K + ++ Y+++ E AV+LA++ L + S + LE+A +M +GK Sbjct: 63 KICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLEVAQS---GQNNLEVA---IMENGK 217
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA1A_ARATH (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 4.353e-16 Identity = 47/152 (30.92%), Postives = 84/152 (55.26%), Query Frame = -2 Query: 296 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD--DISREEAVQLALKVLSKTMDSTSLTSDKLELA 745 K++K+DDH+ A+AG+ +D +L R ++ +++ Y+ P+PV +LV L D Q TQ RP+GV L G D++ G LY + PSGNY ++ ++ L++ ++ D SRE+ ++ A+ + +T+ +L S +A Sbjct: 62 KIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDES-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAILAVRETLQGETLKSSLCTVA 212 The following BLAST results are available for this feature:
BLAST of CF834747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834747 ID=CF834747; Name=CF834747; organism=Citrus sinensis; type=EST; length=746bpback to top |