CF834747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25 Identity = 60/150 (40.00%), Postives = 95/150 (63.33%), Query Frame = -2 Query: 299 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTM-DSTSLTSDKLEL 745 K++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK LS T+ + LT + +E+ Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25 Identity = 60/150 (40.00%), Postives = 95/150 (63.33%), Query Frame = -2 Query: 299 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTM-DSTSLTSDKLEL 745 K++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK LS T+ + LT + +E+ Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25 Identity = 60/150 (40.00%), Postives = 95/150 (63.33%), Query Frame = -2 Query: 299 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTM-DSTSLTSDKLEL 745 K++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK LS T+ + LT + +E+ Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25 Identity = 60/150 (40.00%), Postives = 95/150 (63.33%), Query Frame = -2 Query: 299 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTM-DSTSLTSDKLEL 745 K++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK LS T+ + LT + +E+ Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25 Identity = 60/150 (40.00%), Postives = 95/150 (63.33%), Query Frame = -2 Query: 299 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTM-DSTSLTSDKLEL 745 K++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK LS T+ + LT + +E+ Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.928e-25 Identity = 60/150 (40.00%), Postives = 95/150 (63.33%), Query Frame = -2 Query: 299 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTM-DSTSLTSDKLEL 745 K++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +L+M++PSG Y ++ L+++YK+D++ EE + LALK LS T+ + LT + +E+ Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKALSATLKPNEKLTPNTVEI 216
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.750e-25 Identity = 63/160 (39.38%), Postives = 94/160 (58.75%), Query Frame = -2 Query: 290 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVL----SKTMD----STSLTSDKLELAEV 745 K+YKIDDH+ A AG+ D ILI+ ARV R+ Y EP PVE + + + D KQ YTQ GG+RPFGV+ +FAG + + ++Y +DP G Y +K + ++ Y+ D+S EEA +LALK+L KT++ + + D++ELA + Sbjct: 70 KIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAIIRKTVEDKEKAIATLPDQVELAYI 229
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.143e-24 Identity = 58/152 (38.16%), Postives = 95/152 (62.50%), Query Frame = -2 Query: 290 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 745 K+YKID+H+ A +G+++DA +LI+ AR++AQ Y EP+ V++L + +CD KQ YTQ+GG+RPFGVS L AG D+ +LY +DPSG +K +++Y+DD+S ++A+ L L + +++S L + +E+ V Sbjct: 66 KIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEVP--KLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIES-ELVPENIEVGYV 214
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.264e-23 Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = -2 Query: 299 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLEL 745 K+ I H+ +G+ D +L+ AR AQ+Y YQEP+P QLVQ + Q YTQ GG+RPFGVS L AGWD+ + L+ SDPSG Y WK ++ L++ Y +D+ E+A+ A+ L ++ + +T D +E+ Sbjct: 64 KVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEG-QMTEDNIEV 210
BLAST of CF834747 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.650e-23 Identity = 63/178 (35.39%), Postives = 103/178 (57.87%), Query Frame = -2 Query: 218 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKV--KYQVCSPEALSKLLVK 745 K+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y +D++ E ++LAL LSKT + L + +++A + SGK+ K V E + K + K Sbjct: 68 KIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGMELALYALSKTTE--ELKPENIDMA--IVKDSGKLVEKISVDEIEKIVKAVYK 240 The following BLAST results are available for this feature:
BLAST of CF834747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834747 ID=CF834747; Name=CF834747; organism=Citrus sinensis; type=EST; length=746bpback to top |