CF834748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP56_SCHPO (Nucleolar protein 56 OS=Schizosaccharomyces pombe GN=nop56 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 35/122 (28.69%), Postives = 66/122 (54.10%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI 497 ++ +M+ +APNL+ ++G V A+L+ AG L+ L+K PA VQ+LGA+K T + + G + + + R R LA K ++A+R+D+ P+ G+ R ++ +++ Sbjct: 287 YLVQKMNVVAPNLAELIGEMVGARLISHAGSLTNLSKCPASTVQILGAEKALFRALKTRGNTPKYGIIYHSSFIGKAGAKNKGRISRFLANKCSIASRIDNFSDAPTTAFGQVLRRQVEERL 408
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: Y694_METJA (Uncharacterized NOP5 family protein MJ0694 OS=Methanocaldococcus jannaschii GN=MJ0694 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEK 503 ++E M+ APN++ + G ++ A+L+G AGGL LAKMPA +Q+LGA+K A + G + + Q +P R + R LA K +AAR D GD E+++K++E+ Sbjct: 238 YLEKLMNEEAPNITKLAGVSLGARLIGLAGGLEKLAKMPASTIQVLGAEKALFAHLRMGVEPPKHGIIYNHPLIQGSPHWQRGKIARALACKLAIAARADYV-GD---YIADELLEKLNKRVEE 357
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_VANPO (Nucleolar protein 58 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=NOP58 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11 Identity = 40/126 (31.75%), Postives = 65/126 (51.59%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTR--GDPSGTAGRSFREEIHKKIEK 503 ++ SRM IAPNL+ +VG V A+L+ +G L +LAK PA +Q+LGA+K T + G L + + + R+LAAK+ ++ R D+ D SG G R ++ ++ + Sbjct: 275 YLSSRMKAIAPNLTQLVGELVGARLIAHSGSLISLAKSPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQATGKNKGKIARVLAAKAAVSLRYDALAEDRDDSGDIGLEARAKVENRLSQ 400
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_KLULA (Nucleolar protein 58 OS=Kluyveromyces lactis GN=NOP58 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11 Identity = 40/126 (31.75%), Postives = 65/126 (51.59%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTR--GDPSGTAGRSFREEIHKKIEK 503 ++ SRM IAPNL+ +VG V A+L+ +G L +LAK PA +Q+LGA+K T + G L + + + R+LAAK+ ++ R D+ D SG G R ++ ++ + Sbjct: 275 YLSSRMKAIAPNLTQLVGELVGARLIAHSGSLISLAKSPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQASGKNKGKIARVLAAKAAVSLRYDALAEDRDDSGDIGLESRAKVESRLSQ 400
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_MOUSE (Nucleolar protein 58 OS=Mus musculus GN=Nop58 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 39/122 (31.97%), Postives = 64/122 (52.46%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI 497 ++++RM IAPN++ +VG V A+L+ AG L LAK A VQ+LGA+K + + G + + + P + + R+LAAK+ LA R D+ D S G R ++ ++ Sbjct: 274 YLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQSSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGIENRAKLEARL 395
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_ASPCL (Nucleolar protein 58 OS=Aspergillus clavatus GN=nop58 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 41/141 (29.08%), Postives = 67/141 (47.52%), Query Frame = 3 Query: 12 VSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS 434 V A + G + +D L+ ++ +RM+ IAPNL+A+VG V A+L+ AG L+ L+K PA +Q+LGA+K T + G + + + + R+LAAK++L RVD+ Sbjct: 237 VKAAADRSMGTEISQDDLENIQALAEQVVGFAEYRQQLAGYLTARMNAIAPNLTALVGDLVGARLIAHAGSLTNLSKSPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKMARVLAAKASLGIRVDA 377
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP56_DICDI (Nucleolar protein 56 OS=Dictyostelium discoideum GN=nop56 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 39/123 (31.71%), Postives = 66/123 (53.66%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 500 ++ +M IAPNLSA+VG + AKL+ AG L++LAK PA VQ+LGA+K + G + S+ + R R L+ K ++A R+D +P+ G + ++++ +I+ Sbjct: 283 YLAKKMQDIAPNLSALVGDRIGAKLISRAGSLTSLAKYPASTVQILGAEKALFRAMKVRGKTPKYGIIFNASAV-SSETKNKGRIARCLSNKISIATRIDCFSDNPTAKFGVALKQQVADRIK 404
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP5C_ARATH (Putative nucleolar protein 5-3 OS=Arabidopsis thaliana GN=NOP5-3 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 38/121 (31.40%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 135 VESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI 497 ++++M+ IAPNL+A+VG V A+L+ G L L+K+P +Q+LGA+K T + + G + + + P + + R LAAKS LA R D+ T G R ++ ++ Sbjct: 245 LKNKMNKIAPNLTALVGELVGARLISHCGSLWNLSKLPWSTIQILGAEKTLYKALKTKQATPKYGLIYHAPLVRQAAPENKGKIARSLAAKSALAIRCDAFGNGQDNTMGVESRLKLEARL 365
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_NEOFI (Nucleolar protein 58 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=nop58 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 36/101 (35.64%), Postives = 58/101 (57.43%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS 434 ++ +RM+ IAPNL+A+VG V A+L+ AG L+ L+K PA +Q+LGA+K T + G + + + + R+LAAK++L RVD+ Sbjct: 277 YLTARMNAIAPNLTALVGELVGARLIAHAGSLTNLSKSPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKMARVLAAKASLGLRVDA 377
BLAST of CF834748 vs. ExPASy Swiss-Prot
Match: NOP58_ASPFU (Nucleolar protein 58 OS=Aspergillus fumigatus GN=nop58 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 36/101 (35.64%), Postives = 58/101 (57.43%), Query Frame = 3 Query: 132 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS 434 ++ +RM+ IAPNL+A+VG V A+L+ AG L+ L+K PA +Q+LGA+K T + G + + + + R+LAAK++L RVD+ Sbjct: 277 YLTARMNAIAPNLTALVGELVGARLIAHAGSLTNLSKSPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKMARVLAAKASLGLRVDA 377 The following BLAST results are available for this feature:
BLAST of CF834748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834748 ID=CF834748; Name=CF834748; organism=Citrus sinensis; type=EST; length=721bpback to top |