CF834749

Overview
NameCF834749
Unique NameCF834749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7791 contig Csv1_Contig7791:88..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834749 vs. ExPASy Swiss-Prot
Match: EF1A_HELZE (Elongation factor 1-alpha (Fragment) OS=Heliothis zea PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 60/98 (61.22%), Postives = 82/98 (83.67%), Query Frame = -1 
Query:  413 KDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 706
            K++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  316 KNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CF834749 vs. ExPASy Swiss-Prot
Match: EF1A_HELVI (Elongation factor 1-alpha (Fragment) OS=Heliothis virescens PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 60/98 (61.22%), Postives = 82/98 (83.67%), Query Frame = -1 
Query:  413 KDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 706
            K++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  316 KNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CF834749 vs. ExPASy Swiss-Prot
Match: EF1A_HELGL (Elongation factor 1-alpha (Fragment) OS=Helicoverpa gelotopoeon PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 60/98 (61.22%), Postives = 82/98 (83.67%), Query Frame = -1 
Query:  413 KDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 706
            K++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  316 KNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CF834749 vs. ExPASy Swiss-Prot
Match: EF1A_HELDI (Elongation factor 1-alpha (Fragment) OS=Heliocheilus discalis PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 60/98 (61.22%), Postives = 82/98 (83.67%), Query Frame = -1 
Query:  413 KDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 706
            K++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  316 KNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CF834749 vs. ExPASy Swiss-Prot
Match: EF1A_HELAM (Elongation factor 1-alpha (Fragment) OS=Helicoverpa armigera PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 60/98 (61.22%), Postives = 82/98 (83.67%), Query Frame = -1 
Query:  413 KDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 706
            K++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  316 KNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CF834749 vs. ExPASy Swiss-Prot
Match: EF1A_HELAL (Elongation factor 1-alpha (Fragment) OS=Heliocheilus albipunctella PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 60/98 (61.22%), Postives = 82/98 (83.67%), Query Frame = -1 
Query:  413 KDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 706
            K++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  316 KNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CF834749 vs. ExPASy Swiss-Prot
Match: EF1A_ANIIF (Elongation factor 1-alpha (Fragment) OS=Anicla infecta PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 60/98 (61.22%), Postives = 82/98 (83.67%), Query Frame = -1 
Query:  413 KDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 706
            K++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  316 KNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CF834749 vs. ExPASy Swiss-Prot
Match: EF1A_ADIBE (Elongation factor 1-alpha (Fragment) OS=Adisura bella PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 60/98 (61.22%), Postives = 82/98 (83.67%), Query Frame = -1 
Query:  413 KDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 706
            K++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  316 KNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CF834749 vs. ExPASy Swiss-Prot
Match: EF1A_METHJ (Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=tuf PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = -1 
Query:  362 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 703
            D+P   A  FT+Q++++ HP  I  GY PV  CHT+  A  F+ELV K+D R+G+ LE+ P FLK GDA ++K  PTKP+ +E   ++P LGRFA+RDM QT+A G+  NV KK
Sbjct:  309 DNPPAVAEEFTAQIVVLQHPSAITVGYTPVFHCHTAQTACTFTELVKKLDPRTGQTLEENPTFLKAGDAAIIKCHPTKPLCLENAKEFPQLGRFAIRDMGQTIAAGMCINVVKK 422
[Close]
BLAST of CF834749 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 7.731e-28
Identity = 55/112 (49.11%), Postives = 83/112 (74.11%), Query Frame = -1 
Query:  368 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 703
            ++P   A  FT+++I++ HP  + NGY PV+  HT+ +A + SELV+K+D R+G+E EK P+FLK GD  +VK  P KP+ VE ++++PPLGRFA+RDM +TV VG+I +V+
Sbjct:  317 NNPPTVADEFTARIIVVWHPTALANGYTPVIHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPLGRFAMRDMGKTVGVGIIVDVK 428
The following BLAST results are available for this feature:
BLAST of CF834749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
EF1A_HELZE4.679e-3361.22Elongation factor 1-alpha (Fragment) OS=Heliothis ... [more]
EF1A_HELVI4.679e-3361.22Elongation factor 1-alpha (Fragment) OS=Heliothis ... [more]
EF1A_HELGL4.679e-3361.22Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELDI4.679e-3361.22Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_HELAM4.679e-3361.22Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELAL4.679e-3361.22Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_ANIIF4.679e-3361.22Elongation factor 1-alpha (Fragment) OS=Anicla inf... [more]
EF1A_ADIBE4.679e-3361.22Elongation factor 1-alpha (Fragment) OS=Adisura be... [more]
EF1A_METHJ3.470e-2850.00Elongation factor 1-alpha OS=Methanospirillum hung... [more]
EF1A_SULSO7.731e-2849.11Elongation factor 1-alpha OS=Sulfolobus solfataric... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834749 ID=CF834749; Name=CF834749; organism=Citrus sinensis; type=EST; length=706bp
CTCGAGTTTTCTTTTTTTTTTTTTTGAACCATCAAAAACAGTCGCCCATT
CTCTCAGGGCAAAATTTAATACAACACCTACAAAATATATGAGCACCGAC
TAAATTTTCAAAATCGAGCACTAACGGCTAATCTTGAAACAAAATGTTTG
ACATCCAAAAACTGGTTTATCAACTTACCAAAAAAAAACTCTGATATAAA
ACCAAATTCAGAGAATTAAAATGAAGTCCCGTAAAACAAACTAAAACACG
ACAAAAATAGCATAAACAGAGAAAATAAAAGCTAACTATAGCAGATAGAT
CCCAAAAAACTCCTCACTTCTTCTTGGCTGCAGACTTGGTGACCTTGGCA
CCTGTTGGATCCTTCTTTTCAACATTCTTAATCACACCAACAGCAACAGT
CTGACGCATGTCCCTAACGGCAAAACGACCAAGAGGTGGGTAGTCAGAGA
AGGTTTCAACAACCATGGGCTTGGTGGGAATCATCTTAACCATTCCAGCA
TCTCCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTGCCTGATCG
CCTATCAATCTTCGTCACGAGCTCAGAAAACTTGACGGCAATGTGGGAGG
TGTGGCAGTCAAGCACTGGGGCATATCCATTTCCAATCTGGCCAGGGTGG
TTCATGATGATGACCTGTGAGGTGAAGTTGGCAGCTTCCCTGGCTGGATC
ATCCTT
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