CF834751

Overview
NameCF834751
Unique NameCF834751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16
Identity = 54/184 (29.35%), Postives = 93/184 (50.54%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKC--RTPNDNTT-LLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRDG  S      + +P    + +++   F + G+D   LV L G+H++G +HC  +  RLY      + DP+L+ ++  ++   KC    P+      +  D G+    D +YY  +L  +GL + D  L  +  T  +VK++ +     FF EF ++++ +  N   TGS+GEIRK+C   N
Sbjct:  151 RRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPSLNPDHVPHM-LHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQ-AYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLAN 327          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 58/213 (27.23%), Postives = 96/213 (45.07%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKC--------------------------------RTPNDNTTLLEM---DPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCA 550
            R+D   + R  A + +PAP    +++ + F+ +G + ++ V L GAH+IG++HCT   +RLYNF+  G  DP L+  +   LK  KC                                 + N N  ++++   + G  + F   Y+  L++ +GL  SD  L  +  T   V+      L  F  EFA S+ K+    V TG  G++R  C+
Sbjct:  188 RKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKT-KCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGSEVTEMWVRAYASDPL-LFRREFAMSMMKLSSYNVLTGPLGQVRTSCS 398          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 54/181 (29.83%), Postives = 95/181 (52.49%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            R+D R +  + A   +PAP +N ++    FA++G + +++V+L+GAHT+G S C  + +              L+   +A L+   C    ++T L+ +DP S  TFD  Y+  L+K +GL  SD  L  ++ T++ V++  + +   F  +FA ++ KM       G + EIR  C+ VN
Sbjct:  182 RQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRCAVLCT-----------STNLNQNRSATLQC-TCPASANDTGLVGLDP-SPGTFDKKYFEELVKGQGLLFSDQELMQSNATVTAVRR-YRDATGAFLTDFAAAMVKMSNLPPSAGVQLEIRNVCSRVN 348          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 58/187 (31.02%), Postives = 94/187 (50.27%), Query Frame = 2
Query:    2 KVPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLV-LLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            KV   RRDG  S  S+    +  PT +     ++F + G ++  +V L+ G HT+GV+HC+    R+        +DP +DS+  A LK + CR PND +  ++ +   R   D   Y  ++++R +   D +L  +  T S+V      + + F   FA++++KMG   V TG  GEIR  C   N
Sbjct:  137 KVRTGRRDGLRSNPSDV--KLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI--------KDPKMDSKLRAKLK-KSCRGPNDPSVFMDQNTPFR--VDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFAYNN-KLFKESFAEAMQKMGEIGVLTGDSGEIRTNCRAFN 309          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13
Identity = 54/181 (29.83%), Postives = 93/181 (51.38%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            R D   +  S A N +PAP++N T+  + F+++   ++++V L+GAHT+G + C++V +        G+ +P      AA L+   C     ++ L ++D  +   FD  YY+ L   +G+  SD  LT N+ T   V      ++  F  +FA ++ KMG      G++ EIR  C+ VN
Sbjct:  192 RSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARCSTVCTS-------GNVNP------AAQLQC-NCSATLTDSDLQQLDT-TPAVFDKVYYDNLNNNQGIMFSDQVLTGNTTTAGFV-TTYSNNVTVFLEDFAAAMIKMGNLPPSAGAQLEIRDVCSRVN 356          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13
Identity = 55/181 (30.39%), Postives = 92/181 (50.83%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            R D R +  S A N +PAP +N T+  + F+++   L+++V L+GAHT+G + C++V +        G+ +P      AA L+   C     ++ L ++D  +   FD  YY+ L   +G+  SD  LT ++ T   V       +  F  +FA ++ KMG      G++ EIR  C+ VN
Sbjct:  193 RSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARCSTVCTS-------GNVNP------AAQLQC-NCSATLTDSDLQQLDT-TPTMFDKVYYDNLNSNQGIMFSDQVLTGDATTAGFVTD-YSNDVNVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVN 357          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 56/190 (29.47%), Postives = 90/190 (47.37%), Query Frame = 2
Query:   11 PLRRDGRVSIRSE--APNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGD-QDPALDS-------EYAANLKARKCR-TPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRC 547
            PL R   +S  S+  A + +P  T +       FAN+G+ +++ V + GAHTIGV+HC +V SR  N     +  DP   +       E++   +A +    PND T+++         FD +YY+  +  RG    D+ +  +  T   V +      + FF  F+ +  K+   KV TG+EG IR  C
Sbjct:  156 PLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQTSVI---------FDTAYYDDAIAGRGNLRIDSEIGADPRTRPFV-EAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVC 335          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 53/181 (29.28%), Postives = 90/181 (49.72%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            R D R +  + A   +PAP +N T+  + F ++   L+++V L+GAHT+G + C++V +        G+ +P      AA L+   C     ++ L ++D  +   FD  YY+ L   +G+  SD  LT ++ T   V       +  F  +FA ++ KMG      G++ EIR  C+ VN
Sbjct:  192 RSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARCSTVCTS-------GNVNP------AAQLQC-NCSATLTDSDLQQLDT-TPTMFDKVYYDNLNNNQGIMFSDQVLTGDATTAGFVTD-YSNDVSVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVN 356          
The following BLAST results are available for this feature:
BLAST of CF834751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER42_ARATH2.295e-1629.35Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER48_ARATH3.914e-1627.23Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PERN_IPOBA2.537e-1529.83Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER8_ARATH4.328e-1531.02Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER2_SOLLC1.066e-1329.83Suberization-associated anionic peroxidase 2 OS=So... [more]
PER1_SOLLC1.066e-1330.39Suberization-associated anionic peroxidase 1 OS=So... [more]
PER29_ARATH3.102e-1329.47Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PERX_SOLTU2.626e-1229.28Suberization-associated anionic peroxidase OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834751 ID=CF834751; Name=CF834751; organism=Citrus sinensis; type=EST; length=702bp
GAAAGTTCCCCCGTTACGAAGAGACGGGCGAGTCTCCATTCGTTCAGAAG
CCCCAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCTTCAACGA
AGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGCTCTCAGG
TGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGCCGGCTGT
ACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAGTGAATAT
GCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATAACACTAC
ATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTTAGCTACT
ACAATCTTTTGCTTAAGAGAAGGGGTCTCTTTGTATCTGATGCTTCTTTG
ACTACAAACTCTTTCACTTTGTCTTTGGTTAAGCAACTTCTTCAGGGATC
ATTGGAAAATTTCTTTGCTGAATTTGCCAAGTCTGTGGAGAAAATGGGAA
GGAATAAGGTTAAGACTGGATCAGAAGGTGAGATCAGGAAGCGTTGCGCT
TTTGTCAATTAGCTAAGCTTGGAGGCATTTCGGTCTTTTTTCTACTTTTT
CATTCCATTTTCTTTTTCTCCTTGATTTTATTTTCTTATTTGGGCCGACG
AACAAAAATGAATGACCAAGTTTTGCTTTTACTGTGAGAAGGTCAATGAT
CT
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