CF834751

Overview
NameCF834751
Unique NameCF834751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:456..1157. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.025e-25
Identity = 73/188 (38.83%), Postives = 100/188 (53.19%), Query Frame = 2
Query:    5 VPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDL-KDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASL--TTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            VP  RRD   +  + A   +P+P +  T L+ +FA+ GL+   DLV LSG HT G + C  V+ RLYNF G    DP+L+  Y   L+ R C    + T L+  D  +  TFD  YY  LL  +GL  SD  L  T  + T+ LV Q    +   FF  F  ++ +MG  K  TG++GEIR+ C  VN
Sbjct:  148 VPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELR-RLCPQNGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFV-FFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVN 333          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25
Identity = 70/190 (36.84%), Postives = 99/190 (52.11%), Query Frame = 2
Query:    2 KVPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDL-KDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTN---SFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            KVP  RRD        A +N+P P++   +L+  F N GLD   DLV LSG HT G + C  +  RLYNF+  G  DP LD  Y + L+ ++C    + + L++ D  +   FD  YY  L + +GL  SD  L ++   S T+ LV+    G    FF  F +++ +MG     TG +GEIR  C  VN
Sbjct:  142 KVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLR-KQCPRNGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQ-GKFFDAFVEAMIRMGNLSPSTGKQGEIRLNCRVVN 329          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24
Identity = 71/194 (36.60%), Postives = 107/194 (55.15%), Query Frame = 2
Query:    2 KVPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDL-KDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTN---SFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN*LSL 571
            +VP  RRD R +    A  N+PAP+     L+ +FAN GL+   DLV LSG HT G + C  +  RLYNF+  G  DP L++ Y   L+ ++C    + + L++ D  +   FD  YY  L +++GL  SD  L ++   + T+ LV+    G+ + FF  F +++ +MG     TG++GEIR  C  VN  SL
Sbjct:  127 RVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLR-QQCPRNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSYADGT-QTFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSL 318          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24
Identity = 71/185 (38.38%), Postives = 95/185 (51.35%), Query Frame = 2
Query:    5 VPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDP--ALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAF 553
            VP  RRD   +    A  N+P+P      +   F   GLDLKD+V+LSGAHTIG + C  +  RL+NF G G  DP  A  S   + LK       + ++ L  +D  S   FD +YY  L+   GL  SD +L T+    +LVK   +     F  +FA S+ KMG   V TGS+G IR +C F
Sbjct:  165 VPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPY-LFSRDFAVSMVKMGNIGVMTGSDGVIRGKCGF 348          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24
Identity = 74/186 (39.78%), Postives = 101/186 (54.30%), Query Frame = 2
Query:    5 VPPLRRDGRVSIRSEAP-NNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            VP  RRD       E   NN+P P  N + L   FAN+ L++ DLV LSG HTIG++HC S + RLY      +QDP ++  +A +LK R C T N + T +  D  S   FD  YY  L+ R+GLF SD  L  +  T  +V+       + FF  F  ++ KMG+  V TG++GEIR  C+  N
Sbjct:  162 VPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLY-----PNQDPTMNQFFANSLK-RTCPTANSSNTQVN-DIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQ-QLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSARN 339          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24
Identity = 72/190 (37.89%), Postives = 98/190 (51.58%), Query Frame = 2
Query:    2 KVPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLD-LKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTN---SFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            +VP  RRD        A +N+PAP      L+  F N GLD   DLV LSG HT G + C  +  RLYNF+  G  DP LD  Y + L+ ++C    + + L++ D  +   FD  YY  L + +GL  SD  L ++   S TL LV++   G    FF  FAK++ +M      TG +GEIR  C  VN
Sbjct:  140 RVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLR-KQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQ-GKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVN 327          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 64/183 (34.97%), Postives = 98/183 (53.55%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASL--TTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            R+D   + RS A ++IP+P     ++   F N+G+DL DLV LSGAHT G + C +   RL+NF G G+ D  +D+ +   L+    +  N+  T   +D  +   FD  Y+  L   +GL  +D  L  T+ S T+++V +   GS   FF +F  S+ K+G     TG+ G+IR  C  VN
Sbjct:  143 RKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNR-YAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24
Identity = 65/181 (35.91%), Postives = 91/181 (50.28%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            R DG VS  S    N+P P++N   L   F    L  +D++ LS AHT+G +HC  V  R++ F G+   DP L+  YA  L+ + C    D    + MDP + KTFD +Y+  L + +GLF SD  L T+  +   V      S   F   F  ++ K+GR  VK  S G IR+ C   N
Sbjct:  151 RFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQ-KACPKNVDPRIAINMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFTDGRSRPTVNAWASNSTA-FNRAFVIAMTKLGRVGVKNSSNGNIRRDCGAFN 329          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24
Identity = 70/194 (36.08%), Postives = 105/194 (54.12%), Query Frame = 2
Query:    2 KVPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDL-KDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTN---SFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN*LSL 571
            +VP  RRD   +  + A  N+PAP      L+ SF N GLD   DLV LSG HT G + C  +  RLYNF+  G  DP L++ Y   L+  +C    + T L++ D  +   FD  YY  L + +GL  +D  L ++   + T+ LV++   G+ + FF  F +++ +MG     TG++G+IR+ C  VN  SL
Sbjct:  147 RVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRG-QCPRNGNQTVLVDFDLRTPTVFDNKYYVNLKELKGLIQTDQELFSSPNATDTIPLVREYADGT-QKFFNAFVEAMNRMGNITPLTGTQGQIRQNCRVVNSNSL 338          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24
Identity = 70/189 (37.04%), Postives = 106/189 (56.08%), Query Frame = 2
Query:    2 KVPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLL---QGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            +VP  R DGR+S  S+   N+P P+++    ++ FA + L+  DLV L G HTIG + C  V  R  NF G G  DP++D  +   + A   + P +  T +E+D GS   FD S+   +   R +  SD  L  +  T +++++LL   + SL  F  EF KS+ KM   +VKTGS+GEIR+ C+ +N
Sbjct:  149 EVPLGRLDGRISQASDV--NLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILA---QCPQNGGTRVELDEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDPETRAIIERLLGLRRPSL-RFGTEFGKSMVKMSLIEVKTGSDGEIRRVCSAIN 331          
The following BLAST results are available for this feature:
BLAST of CF834751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER23_ARATH6.025e-2538.83Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER2_ARMRU7.869e-2536.84Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER1C_ARMRU1.028e-2436.60Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER10_ARATH1.028e-2438.38Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER12_ARATH1.342e-2439.78Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER37_ARATH1.753e-2437.89Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PERX_TOBAC2.990e-2434.97Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER35_ARATH3.905e-2435.91Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER32_ARATH3.905e-2436.08Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER69_ARATH5.101e-2437.04Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834751 ID=CF834751; Name=CF834751; organism=Citrus sinensis; type=EST; length=702bp
GAAAGTTCCCCCGTTACGAAGAGACGGGCGAGTCTCCATTCGTTCAGAAG
CCCCAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCTTCAACGA
AGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGCTCTCAGG
TGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGCCGGCTGT
ACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAGTGAATAT
GCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATAACACTAC
ATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTTAGCTACT
ACAATCTTTTGCTTAAGAGAAGGGGTCTCTTTGTATCTGATGCTTCTTTG
ACTACAAACTCTTTCACTTTGTCTTTGGTTAAGCAACTTCTTCAGGGATC
ATTGGAAAATTTCTTTGCTGAATTTGCCAAGTCTGTGGAGAAAATGGGAA
GGAATAAGGTTAAGACTGGATCAGAAGGTGAGATCAGGAAGCGTTGCGCT
TTTGTCAATTAGCTAAGCTTGGAGGCATTTCGGTCTTTTTTCTACTTTTT
CATTCCATTTTCTTTTTCTCCTTGATTTTATTTTCTTATTTGGGCCGACG
AACAAAAATGAATGACCAAGTTTTGCTTTTACTGTGAGAAGGTCAATGAT
CT
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