CF834751

Overview
NameCF834751
Unique NameCF834751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:456..1157. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23
Identity = 66/183 (36.07%), Postives = 93/183 (50.82%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASL--TTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRDG  +  S A +++P+P      +   F   GL   D+V LSGAHT G   C + ++RL+NF G G+ DP L+S   ++L+ + C     NT +  +D  +   FD +Y+  L    GL  SD  L   T S T+ +V          FF  F +S+ KMG     TGS GEIR+ C  VN
Sbjct:  154 RRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQ-QLCPQNGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQ-TLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVN 334          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23
Identity = 71/188 (37.77%), Postives = 96/188 (51.06%), Query Frame = 2
Query:    5 VPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDL-KDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASL--TTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            VP  RRD   +    A   +P+P      L+++FA+ GL+   DLV LSG HT G + C  V+ RLYNF G    DP LD  Y   L+A  C    + T L+  D  +  TFD  YY  L   +GL  SD  L  T  + T+ LV  L   +   FF  F  ++ +MG  +  TG++GEIR+ C  VN
Sbjct:  148 VPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRA-LCPQNGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLV-NLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQNCRVVN 333          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22
Identity = 75/192 (39.06%), Postives = 103/192 (53.65%), Query Frame = 2
Query:    2 KVPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFT---GVGDQDPALDSEYAANLKARKCRTPNDNTTLL--EMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAE-FAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            +VP  RRDGRVS  +E  + +P PT+    L   F  + L ++D+V+LSGAHT+G S C S   R++N +        D  L   YA  L+A  C +    TT +   MDPG+    D +YY LL +  GLF SD  L  N    +LV      S E  + E FA ++ KMGR +V+TG+ GE+R  C  VN
Sbjct:  152 QVPAGRRDGRVSNATETVD-LPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRA-LCPSNTTQTTPITTAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNPQMAALVSSF--ASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVN 339          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22
Identity = 68/183 (37.16%), Postives = 99/183 (54.10%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKC--RTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRD + + ++ A +NIPAP+ + + L  SF+  GL  +D+V LSGAHTIG S C +  +R+YN T +        +   A L+ R C     + +  L  +D  S  +FD SY+  L+ +RGL  SD  L     T S+V+     S  +F ++FA ++ KMG     TGS GEIRK C   N
Sbjct:  123 RRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETNI--------NAAFATLRQRSCPRAAGSGDANLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFNGGSTDSIVRG-YSNSPSSFNSDFAAAMIKMGDISPLTGSSGEIRKVCGKTN 296          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22
Identity = 60/184 (32.61%), Postives = 102/184 (55.43%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQG---SLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            R+DG V+ ++ A NN+P+P      +   F    L++ D+V LSGAHT G + C   S+RL+NFTG+G+ D  L++   +NL+   C    ++     +D  +  TFD +Y+  LL+ +GL  SD  L ++   ++  K+L++    S   FF +F  ++ +MG   +  G+ GE+R  C  +N
Sbjct:  148 RKDGLVANQNSA-NNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQT-VCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMG--NISNGASGEVRTNCRVIN 327          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 66/183 (36.07%), Postives = 97/183 (53.01%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASL--TTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRD   +  + A ++IP+P  + + +   F+  GL+  DLV LSGAHT G + C   ++RL+NF+G G+ DP L+S   + L+ + C      +T+  +D  +   FD +Y+  L    GL  SD  L  TT S T+++V          FF  FA+S+  MG     TGS GEIR  C  VN
Sbjct:  153 RRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQ-QLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQ-TLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVN 333          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = 2
Query:    2 KVPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFF-----AEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            +VP  RRDGRVS  S A  ++P  +++  +L+  F  +GL+ KDLVLLS AHTIG + C  +S RLY+F   G  DP ++  +   L   +C    D    L +D  S + FD      +     +  +DA L  +  T  +V   L G L  FF     ++F K++ KMG+  VKTG +GEIR+ C+  N
Sbjct:  139 EVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPEL-TTQCPQNGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYEDVTTRQVVDSYL-GMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVCSAFN 326          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 65/182 (35.71%), Postives = 98/182 (53.85%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCR-TPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRD   +  S+A  ++PAP+++   L  +F+ +GLD+ D+V LSGAHTIG + C +   RLYN T +       DS +A  LKA   R T + ++ L  +D  +   FD +YY  LL  +GL  SD  L     T + V+     +   F + F  ++ KMG     TG++G+IR  C+ VN
Sbjct:  141 RRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNI-------DSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRN-FSSNTAAFNSAFTAAMVKMGNISPLTGTQGQIRLNCSKVN 314          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22
Identity = 63/184 (34.24%), Postives = 100/184 (54.35%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQG---SLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            R+DG V+ +S A NN+P+P      +   FA  GL++ D+V LSGAHT G + C   S+RL+NFTG G  D  L++   ++L+   C    +      +D  S   FD +Y+  LL+ +GL  SD  L ++   ++  K+L++    S   FF +F  S+ +MG   +  G+ GE+R  C  +N
Sbjct:  148 RKDGLVANQSSA-NNLPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQT-VCPIGGNGNKTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFTCSMIRMG--SLVNGASGEVRTNCRVIN 327          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22
Identity = 65/182 (35.71%), Postives = 98/182 (53.85%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCR-TPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRD   +  S+A  ++PAP+++   L  +F+ +GLD+ D+V LSGAHTIG + C +   RLYN T +       DS +A  LKA   R T + ++ L  +D  +   FD +YY  LL  +GL  SD  L     T + V+     +   F + F  ++ KMG     TG++G+IR  C+ VN
Sbjct:  141 RRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNI-------DSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRN-FSSNTAAFNSAFTVAMVKMGNISPLTGTQGQIRLNCSKVN 314          
The following BLAST results are available for this feature:
BLAST of CF834751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER54_ARATH3.306e-2336.07Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER3_ARMRU3.306e-2337.77Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER1_MAIZE1.641e-2239.06Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PERP7_BRARA2.143e-2237.16Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER59_ARATH2.143e-2232.61Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER53_ARATH4.774e-2236.07Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER43_ARATH4.774e-2236.65Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER2_ORYSJ4.774e-2235.71Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PERN_ARMRU6.235e-2234.24Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER2_ORYSI6.235e-2235.71Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834751 ID=CF834751; Name=CF834751; organism=Citrus sinensis; type=EST; length=702bp
GAAAGTTCCCCCGTTACGAAGAGACGGGCGAGTCTCCATTCGTTCAGAAG
CCCCAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCTTCAACGA
AGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGCTCTCAGG
TGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGCCGGCTGT
ACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAGTGAATAT
GCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATAACACTAC
ATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTTAGCTACT
ACAATCTTTTGCTTAAGAGAAGGGGTCTCTTTGTATCTGATGCTTCTTTG
ACTACAAACTCTTTCACTTTGTCTTTGGTTAAGCAACTTCTTCAGGGATC
ATTGGAAAATTTCTTTGCTGAATTTGCCAAGTCTGTGGAGAAAATGGGAA
GGAATAAGGTTAAGACTGGATCAGAAGGTGAGATCAGGAAGCGTTGCGCT
TTTGTCAATTAGCTAAGCTTGGAGGCATTTCGGTCTTTTTTCTACTTTTT
CATTCCATTTTCTTTTTCTCCTTGATTTTATTTTCTTATTTGGGCCGACG
AACAAAAATGAATGACCAAGTTTTGCTTTTACTGTGAGAAGGTCAATGAT
CT
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