CF834751

Overview
NameCF834751
Unique NameCF834751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:456..1157. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19
Identity = 58/178 (32.58%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGS-EGEIRKRC 547
            R DG+ S     P NIP   +    L + FA++GL +++LV+LSG+HTIG +HC +   RLY++ G    DP+LD      L+     +   +  +L +D  +   FD  Y+  L    GL  SD +L  +  T  +  ++ +   + F   F  +++KMG   VK G   GEIR  C
Sbjct:  166 RWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPLDATTPFVFDNGYFTGLGTNMGLLGSDQALFLDPRTKPIALEMARDK-QKFLKAFGDAMDKMGSIGVKRGKRHGEIRTDC 342          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18
Identity = 63/185 (34.05%), Postives = 98/185 (52.97%), Query Frame = 2
Query:    5 VPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            +P  R DG+ S + E   N+P+P  N + L ++F  +G   +D+V LSGAHT+GV+ C+S  +RL         D +LDS +A  L   K  +  DN    +    +R  FD +Y+N L  + G+  SD +L     T +LV        + FF +F +++ KM    VK GS+GE+R+ C  +N
Sbjct:  142 IPKGRFDGKRS-KIEDTRNLPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL------TVPDSSLDSTFANTLS--KTCSAGDNAE--QPFDATRNDFDNAYFNALQMKSGVLFSDQTLFNTPRTRNLVNGYALNQAK-FFFDFQQAMRKMSNLDVKLGSQGEVRQNCRSIN 314          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18
Identity = 62/185 (33.51%), Postives = 93/185 (50.27%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTP----NDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRD   +  + A +++PAP+ +   L  +FA + L   DLV LSGAHTIG++ C +  + +YN T V           AA    R+   P    N +  L  +D  +   FD +YY  LL +RGL  SD  L     T  LV+     +   F  +FA ++ +MG     TG++G+IR+ C+ VN
Sbjct:  148 RRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYNDTNVN----------AAFATLRRANCPAAAGNGDGNLAPLDTATPTAFDNAYYTNLLAQRGLLHSDQQLFNGGATDGLVR-TYASTPRRFSRDFAAAMIRMGNISPLTGTQGQIRRACSRVN 321          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18
Identity = 58/185 (31.35%), Postives = 92/185 (49.73%), Query Frame = 2
Query:    2 KVPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKC--RTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKV-KTGSEGEIRKRC 547
            ++P  R DG++S  S    ++P+P          F  + L L D+VLL G HTIGV+HC+ +  RLYNF      DP++D +    L A KC   +  D    L+ +  S  T D+S+Y  +   RG+   D  L  +  T  +V  +  G+  +F   F +++  +G  +V     +GEIR+ C
Sbjct:  142 EIPTGRLDGKIS--SALLVDLPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSA-KCPKSSSTDGIISLDQNATSSNTMDVSFYKEIKVSRGVLHIDQKLAIDDLTSKMVTDIANGN--DFLVRFGQAMVNLGSVRVISKPKDGEIRRSC 321          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18
Identity = 60/181 (33.15%), Postives = 91/181 (50.28%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRD R S  S   + +P P+   + + + F ++G  ++++V LSGAH+IG SHC     R      VG  +   +  +A  LK      P D T  +  D  +   FD  YY  L K  GL  SD  L ++  T   V  L   + + FF +FAK+++K+    ++TG  GEIR+RC  +N
Sbjct:  143 RRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGR------VGRNNTGYNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFV-DLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18
Identity = 61/185 (32.97%), Postives = 94/185 (50.81%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLY--NFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLEN--FFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRD   +  + A   IPAP ++   L  +F  QGL+++DL+ LSGAHTIG + C S   R+   N       D          +   +C+  + +  L  +D  +   FD  Y+  LL+ RGL +SD  L +      + +++ + ++    FF +F +S+ KMG   V TG EGEIR+ C FVN
Sbjct:  151 RRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPLDIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVESMLKMGNINVLTGIEGEIRENCRFVN 335          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 58/181 (32.04%), Postives = 94/181 (51.93%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRD   + ++ A  ++P P +    L  SFA++GL  +D+V LSGAHTIG + C     R+Y+          +D+ +A+  + R+C    +N  L  +D  +   FD +Y+  L++++GL  SD  L     T ++V +    S   F ++FA ++ KMG     +G  G IRK C  VN
Sbjct:  150 RRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYS------NGTDIDAGFAST-RRRQCPQEGENGNLAPLDLVTPNQFDNNYFKNLIQKKGLLQSDQVLFNGGSTDNIVSE-YSNSARAFSSDFAAAMIKMGDISPLSGQNGIIRKVCGSVN 322          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.202e-18
Identity = 62/187 (33.16%), Postives = 102/187 (54.55%), Query Frame = 2
Query:    5 VPPLRRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQG-LDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRT-PNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            VP  RRD   +  +EA  ++P   ++   L+ +F  +G L+  D+V LSGAHTIG + C++  +R+Y        D  +++ YAA+L+A   +T  + + +L  +D  +  TFD +YY  L+ ++GL  SD  L  N  T + V+         F + F  ++ KMG    KTG++G+IR  C+ VN
Sbjct:  135 VPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYG------GDTNINAAYAASLRANCPQTVGSGDGSLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNTVRNFASNPAA-FSSSFTTAMIKMGNIAPKTGTQGQIRLSCSRVN 314          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 56/181 (30.94%), Postives = 88/181 (48.62%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            R+D R + +  A N +P+P +  + L  +F N GL   D+V LSG HT+G + CTS ++RL         +   + E+  +L+ + C T   +  + ++D  +  TFD  YY  LL   GL  SD +L         + +        FF +F  ++ KMG   +  GS  EIRK C  +N
Sbjct:  171 RKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQ-QLCSTVGPSVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPGTRAIVETYATDQSVFFEDFKNAMVKMG--GIPGGSNSEIRKNCRMIN 348          
BLAST of CF834751 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18
Identity = 59/181 (32.60%), Postives = 91/181 (50.28%), Query Frame = 2
Query:   17 RRDGRVSIRSEAPNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 559
            RRD R S  S   + +P P+   + L   F+++G  ++++V LSGAHTIG SHC   ++R+      G      +  +A  LK     + ND T  +  D  +   FD  Y+  + K  GL  SD  L ++  T   V +L       FF +FA +++K+  + V TG  GEIR+RC  +N
Sbjct:  154 RRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTG-----YNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFV-ELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
The following BLAST results are available for this feature:
BLAST of CF834751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER19_ARATH8.427e-1932.58Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER47_ARATH1.101e-1834.05Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER70_MAIZE1.437e-1833.51Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER60_ARATH1.437e-1831.35Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER31_ARATH1.437e-1833.15Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER20_ARATH1.437e-1832.97Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PERX_NICSY2.452e-1832.04Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER1_HORVU3.202e-1833.16Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER40_ARATH4.182e-1830.94Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER63_ARATH5.462e-1832.60Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06A23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834751 ID=CF834751; Name=CF834751; organism=Citrus sinensis; type=EST; length=702bp
GAAAGTTCCCCCGTTACGAAGAGACGGGCGAGTCTCCATTCGTTCAGAAG
CCCCAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCTTCAACGA
AGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGCTCTCAGG
TGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGCCGGCTGT
ACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAGTGAATAT
GCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATAACACTAC
ATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTTAGCTACT
ACAATCTTTTGCTTAAGAGAAGGGGTCTCTTTGTATCTGATGCTTCTTTG
ACTACAAACTCTTTCACTTTGTCTTTGGTTAAGCAACTTCTTCAGGGATC
ATTGGAAAATTTCTTTGCTGAATTTGCCAAGTCTGTGGAGAAAATGGGAA
GGAATAAGGTTAAGACTGGATCAGAAGGTGAGATCAGGAAGCGTTGCGCT
TTTGTCAATTAGCTAAGCTTGGAGGCATTTCGGTCTTTTTTCTACTTTTT
CATTCCATTTTCTTTTTCTCCTTGATTTTATTTTCTTATTTGGGCCGACG
AACAAAAATGAATGACCAAGTTTTGCTTTTACTGTGAGAAGGTCAATGAT
CT
back to top