CF834772

Overview
NameCF834772
Unique NameCF834772
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6272 contig Csv1_Contig6272:416..1001. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834772 vs. ExPASy Swiss-Prot
Match: PRDX5_PAPHA (Peroxiredoxin-5, mitochondrial OS=Papio hamadryas GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.418e-22
Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = -3
Query:  194 KKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMRACQENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE-EGGAFTFSGAEAMLKAL 580
            KK +LF VPGAFTP CS+ HLPGFVE++  LK+KGV ++AC+SVNDAFV         +  +V LL+D  G F K     LD S   +    R +R++++ ++G+VK LN+E +G   T S A +++  L
Sbjct:   86 KKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKVEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of CF834772 vs. ExPASy Swiss-Prot
Match: PRX5_HAEIN (Hybrid peroxiredoxin hyPrx5 OS=Haemophilus influenzae GN=HI0572 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.265e-21
Identity = 58/133 (43.61%), Postives = 82/133 (61.65%), Query Frame = -3
Query:  194 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMRACQENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNL---EEGGAFTFSGAEAMLKAL 583
            NK  I+F++PGAFTPTCS  HLP + E +   K  GVD +  +SVND FVM A +E+   ++ +  + DGNG FT+ +G  +   D  +G G RS RY++L +NGVV+ + +   E G  F  S A+ MLK L
Sbjct:   33 NKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKED-EKSENISFIPDGNGEFTEGMGMLVGKED--LGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYL 162          
BLAST of CF834772 vs. ExPASy Swiss-Prot
Match: PRDX5_RAT (Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus GN=Prdx5 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.652e-21
Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  194 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMRACQENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE-EGGAFTFSGAEAMLKAL 583
            +KK +LF VPGAFTP CS+ HLPGFVE++  LK+KG  +VAC+SVNDAFV            +V LL+D  G F K     LD S   +    R +R++++ + GVVK LN+E +G   T S A  +L  L
Sbjct:   83 DKKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDAFVTAEWGRAHQAEGKVQLLADPTGAFGKETDLLLDDSLVSLFGNRRLKRFSMVIDKGVVKALNVEPDGTGLTCSLAPNILSQL 213          
BLAST of CF834772 vs. ExPASy Swiss-Prot
Match: PRDX5_HUMAN (Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=PRDX5 PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 2.158e-21
Identity = 54/115 (46.96%), Postives = 73/115 (63.48%), Query Frame = -3
Query:  236 KKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMRACQENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGG 580
            KK +LF VPGAFTP CS+ HLPGFVE++  LK+KGV +VAC+SVNDAFV            +V LL+D  G F K     LD S   +    R +R++++ ++G+VK LN+E  G
Sbjct:   85 KKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDG 199          
BLAST of CF834772 vs. ExPASy Swiss-Prot
Match: PRDX5_CERAE (Peroxiredoxin-5, mitochondrial OS=Cercopithecus aethiops GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.158e-21
Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = -3
Query:  194 KKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMRACQENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE-EGGAFTFSGAEAMLKAL 580
            KK +LF VPGAFTP CS+ HLPGFVE++  LK+KGV ++AC+SVNDAFV            +V LL+D  G F K     LD S   +    R +R++++ ++G+VK LN+E +G   T S A +++  L
Sbjct:   86 KKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of CF834772 vs. ExPASy Swiss-Prot
Match: PMP20_EMENI (Putative peroxiredoxin pmp20 OS=Emericella nidulans GN=AN8692 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.808e-21
Identity = 56/132 (42.42%), Postives = 84/132 (63.64%), Query Frame = -3
Query:  194 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMRACQENLGI-NDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEG-GAFTFSGAEAMLKAL 583
            +KK ILFA+PGAFTP CS +H+P ++E+  E+++KGVD+VA ++ NDAFVM A  +  G+ ND++L LSD    F+K+IG   +          R++RYA++ ++G V    LE       FS AE ++K L
Sbjct:   45 DKKVILFALPGAFTPVCSARHVPEYIERLPEIRAKGVDVVAVLAYNDAFVMSAWGKANGVKNDDILFLSDPEAKFSKSIGWADEEG--------RTKRYAIVLDHGKVTYAALEPAKNHLEFSSAETVIKHL 168          
BLAST of CF834772 vs. ExPASy Swiss-Prot
Match: MALF3_MALFU (Putative peroxiredoxin (Fragment) OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.808e-21
Identity = 57/127 (44.88%), Postives = 74/127 (58.27%), Query Frame = -3
Query:  200 KKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMRACQENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEAMLK 580
            KK ++ AVPGAFTPTC+  H+P +VEK  ELKSKGVD V  IS ND FV+ A        D +    D N  F+K     LDLS K  G+G+R+ RYAL+A +  V+   ++EG     S A  + K
Sbjct:   41 KKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSK--GMGLRTARYALIANDLKVEYFGIDEGEPKQSSAATVLSK 165          
BLAST of CF834772 vs. ExPASy Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.279e-21
Identity = 52/127 (40.94%), Postives = 77/127 (60.63%), Query Frame = -3
Query:  203 KKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMRACQENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGA-FTFSGAEAML 580
            KK ++F +PGA+T  CSQ+H+P +     + K+KG+D V C+SVND F +    E LG  D +    D +G F K++G + DLS     LG RS R++   E+G VK +N+EE  + F  +GAE +L
Sbjct:   74 KKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLS--AALLGPRSERWSAYVEDGKVKAVNVEEAPSDFKVTGAEVIL 198          
BLAST of CF834772 vs. ExPASy Swiss-Prot
Match: Y1621_SYNY3 (Putative peroxiredoxin sll1621 OS=Synechocystis sp. (strain PCC 6803) GN=sll1621 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20
Identity = 50/112 (44.64%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  245 KKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMRACQENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 580
            KK +LF++PGAFTPTCS  HLP + +   E ++ GVD + C+SVNDAFVM    + +G  D+V LL DGNG FT+ +G  ++ S+  +G G+RS RY++   +G ++ + +E
Sbjct:   40 KKVVLFSLPGAFTPTCSSNHLPRYEQLFEEFQALGVDDIICLSVNDAFVMFQWGKQIGA-DKVKLLPDGNGEFTRKMGMLVEKSN--LGFGMRSWRYSMFVNDGKIEKMFIE 148          
BLAST of CF834772 vs. ExPASy Swiss-Prot
Match: PRDX5_BOVIN (Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PRDX5 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20
Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = -3
Query:  194 KKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMRACQENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE-EGGAFTFSGAEAMLKAL 580
            KK +LF +PGAFTP CS+ HLPGFVE++  LK+KG+ +VAC++VND FV            +V LL+D +G F K     LD S   +    R +R++++ E+G+VK LN+E +G   T S A  +L  L
Sbjct:   90 KKGVLFGLPGAFTPGCSKTHLPGFVEQADALKAKGIQVVACLTVNDVFVTEEWARAHKAEGKVRLLADPSGTFGKETDLLLDDSLLFLFGNHRLKRFSMVIEDGIVKSLNVEPDGTGLTCSLAPNILSQL 219          
The following BLAST results are available for this feature:
BLAST of CF834772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRDX5_PAPHA7.418e-2243.85Peroxiredoxin-5, mitochondrial OS=Papio hamadryas ... [more]
PRX5_HAEIN1.265e-2143.61Hybrid peroxiredoxin hyPrx5 OS=Haemophilus influen... [more]
PRDX5_RAT1.652e-2145.04Peroxiredoxin-5, mitochondrial OS=Rattus norvegicu... [more]
PRDX5_HUMAN2.158e-2146.96Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=... [more]
PRDX5_CERAE2.158e-2143.85Peroxiredoxin-5, mitochondrial OS=Cercopithecus ae... [more]
PMP20_EMENI4.808e-2142.42Putative peroxiredoxin pmp20 OS=Emericella nidulan... [more]
MALF3_MALFU4.808e-2144.88Putative peroxiredoxin (Fragment) OS=Malassezia fu... [more]
PRX2F_ARATH6.279e-2140.94Peroxiredoxin-2F, mitochondrial OS=Arabidopsis tha... [more]
Y1621_SYNY31.399e-2044.64Putative peroxiredoxin sll1621 OS=Synechocystis sp... [more]
PRDX5_BOVIN1.827e-2043.08Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PR... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834772 ID=CF834772; Name=CF834772; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTGGGAAAAAAAATAAATTGAGCAGGATAAACCTCT
AAACAGCTCTGAAAATTCAAATGCACAAGGAGAAGTACAAATTTCAAAAC
CCGAAACACGAGTTTTTAGTAACAAAGACACATTATTCAACACTCTAATG
AAGTTAAATTATTAAAAAAAAAAAAACTATCTCACCGAAATCACAGAGCT
TTGAGCATGGCCTCAGCTCCGCTGAAAGTAAAGGCGCCGCCCTCCTCCAA
ATTGAGCACCTTAACGACGCCGTTTTCTGCCAAAAGGGCGTACCTCCTGG
ACCTAACTCCCAATCCCATAGGCTTGTCACTCAAGTCGAGCTCACAGCCA
ATAGCCTTAGTGAACACCCCGTTCCCATCAGACAACAAAAGCACTTCATC
GTTGATTCCAAGATTCTCCTGGCAGGCCCTCATAACGAAGGCGTCGTTCA
CGGAAATGCAGGCGACGATGTCGACGCCTTTGGATTTCAACTCGGCGGAT
TTCTCGACGAAGCCCGGGAGGTGTTTTTGGGAGCAGGTGGGGGTGAAGGC
GCCGGGGACGGCGAAGAGGATTGCTTTTTTATTGG
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