CF834777

Overview
NameCF834777
Unique NameCF834777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:472..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_ANAVT (Hydroxyacylglutathione hydrolase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gloB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15
Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = -3
Query:  290 QMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 604
            QM +S    L SLP+ T+V+C HEYT+KNL FAL+V+  N                G+ T+PS +  E  TNPF+R + P LQ  V  NDP++    IR  KD +
Sbjct:  154 QMVES-LTKLRSLPENTRVWCAHEYTLKNLQFALSVDSENTELQKRFDEVKTKRSQGIATVPSLLGVEKLTNPFLRWEQPSLQSAVNSNDPVQTFARIRGLKDKF 257          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_MICAN (Hydroxyacylglutathione hydrolase OS=Microcystis aeruginosa (strain NIES-843) GN=gloB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 577
            L SLP  T+V+C HEYT+ NL FALTV+P+N                 LPTIP+ +  E  TNPF+R D P L   +  ++P++    +R +KDN+
Sbjct:  162 LRSLPDQTRVWCAHEYTLNNLKFALTVDPNNAALQQRYREVEKHRAEDLPTIPAILGTEKLTNPFLRWDSPALAMTMDSSEPVQVFARLRGKKDNF 257          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: HAGHL_MOUSE (Hydroxyacylglutathione hydrolase-like protein OS=Mus musculus GN=Haghl PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 41/103 (39.81%), Postives = 57/103 (55.34%), Query Frame = -3
Query:  299 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRK 607
            +QMYQS   TLG+LP  T+V+CGHE+T+ NL FA  VEP N                 +PT+PST+ EEL  NPF+RV    ++   G   P + L  + + +
Sbjct:  150 QQMYQSLAKTLGTLPPETKVFCGHEHTLSNLEFAQKVEPCNEHVQAKLSWAQERDDEDIPTVPSTLGEELMYNPFLRVTEDAVRAFTGQVAPAQVLEALCRER 252          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_ANASP (Hydroxyacylglutathione hydrolase OS=Anabaena sp. (strain PCC 7120) GN=gloB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = -3
Query:  290 QMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 604
            QM +S    L SLP+ T+V+C HEYT+KNL FAL+V+  N                G+ T+PS +  E  TNPF+R + P LQ  V  NDP++    IR  KD +
Sbjct:  154 QMVES-LTKLRSLPENTRVWCAHEYTLKNLQFALSVDSKNTELQKRLDEVKTKRSQGIATVPSLLGVEKLTNPFLRWEQPSLQLAVNSNDPVQTFARIRGLKDKF 257          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_MESSB (Hydroxyacylglutathione hydrolase OS=Mesorhizobium sp. (strain BNC1) GN=gloB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 44/104 (42.31%), Postives = 58/104 (55.77%), Query Frame = -3
Query:  296 MYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND--PIEALREIRKRKD 601
            MY+S    L  LP  T +YCGHEYT  N  FAL+V+P+N                G PT+P+T+ EE+ TNPF+R   P L+  +G  +   +E   EIRKRKD
Sbjct:  151 MYES-LKKLVELPLETVIYCGHEYTESNARFALSVDPTNSALKERAKKIEALRREGRPTLPTTLGEEMATNPFLRCHDPVLRNNLGMKNAADVEVFAEIRKRKD 253          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_SYNY3 (Hydroxyacylglutathione hydrolase OS=Synechocystis sp. (strain PCC 6803) GN=gloB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.659e-14
Identity = 44/105 (41.90%), Postives = 56/105 (53.33%), Query Frame = -3
Query:  290 QMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 604
            QM QS    L  LP  T+++C HEYT+ NL FALTV+PSN                G  TIPS +  E  TNPF+R D P +Q  VG  +P     ++R  KDN+
Sbjct:  154 QMVQS-IGKLRQLPDQTRLWCAHEYTLGNLKFALTVDPSNKDLQERFQTVQGDRQRGQATIPSWLGTEKRTNPFLRWDNPAIQARVGMTEPARVFGKLRGMKDNF 257          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_CYAA5 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain ATCC 51142) GN=gloB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.659e-14
Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 577
            L +LP  T+++C HEYT+ NL FA+TV+  N                   T+PS + EE +TNPF+R D P LQ + G NDP     +IR  KDN+
Sbjct:  162 LRNLPDHTRIWCAHEYTLNNLKFAVTVDKDNSDLQIRYQDVIKARKNEEATVPSLLGEEKKTNPFLRWDQPALQMITGMNDPARVFGKIRGMKDNF 257          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP8 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 8801) GN=gloB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.779e-14
Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 577
            L +LP  T+V+C HEYT+KNL FALTV+P N+               G  T+PS + EE  TNPF+R D   +Q  +G  DP     ++R  KD +
Sbjct:  162 LRNLPDNTRVWCAHEYTLKNLQFALTVDPDNLVLKNRYHQVKEFRHQGQATVPSILGEEKLTNPFLRWDNSAIQLTIGMTDPARVFGKLRGMKDTF 257          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_SHEPA (Hydroxyacylglutathione hydrolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gloB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.241e-14
Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = -3
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVG------FNDPIEALREIRKRKDNW 607
            EQMYQS    LG LP  T+V C HEYT+ NL FA  VEP+N                 LPT+PS+I +E   NPF+R D  E+ + +        N+P+++   +R+ KDN+
Sbjct:  153 EQMYQS-LSELGQLPDNTKVCCAHEYTIANLAFANRVEPNNAALIDYTKKAQALRAQNLPTLPSSIGQEKAINPFLRSDSEEICQSLSIQFQQPINNPLQSFSLLRQWKDNF 263          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHOP2 (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain HaA2) GN=gloB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.241e-14
Identity = 39/97 (40.21%), Postives = 54/97 (55.67%), Query Frame = -3
Query:  293 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGF--NDPIEALREIRKRKDN 577
            L +LP   ++YCGHEYT  N+ FALT+EP N               AG PTIP T+ EE + N F+R D+P +   +GF      +   E+R+RK+N
Sbjct:  158 LRALPDDYKLYCGHEYTASNVKFALTIEPENAALQARAKQVEQQRGAGRPTIPVTLGEEKQANVFLRADVPSVAAAIGFAGESAADVFGELRERKNN 254          
The following BLAST results are available for this feature:
BLAST of CF834777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
GLO2_ANAVT7.373e-1540.95Hydroxyacylglutathione hydrolase OS=Anabaena varia... [more]
GLO2_MICAN1.258e-1440.63Hydroxyacylglutathione hydrolase OS=Microcystis ae... [more]
HAGHL_MOUSE1.642e-1439.81Hydroxyacylglutathione hydrolase-like protein OS=M... [more]
GLO2_ANASP1.642e-1440.95Hydroxyacylglutathione hydrolase OS=Anabaena sp. (... [more]
GLO2_MESSB2.145e-1442.31Hydroxyacylglutathione hydrolase OS=Mesorhizobium ... [more]
GLO2_SYNY33.659e-1441.90Hydroxyacylglutathione hydrolase OS=Synechocystis ... [more]
GLO2_CYAA53.659e-1440.63Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_CYAP84.779e-1440.63Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_SHEPA6.241e-1439.29Hydroxyacylglutathione hydrolase OS=Shewanella pea... [more]
GLO2_RHOP26.241e-1440.21Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834777 ID=CF834777; Name=CF834777; organism=Citrus sinensis; type=EST; length=609bp
TTTTTTTTTTTTTTTTCCTCTAATAAAACACTGAGATCAGGGAACTTATA
ACAATTCCAACATTTCATCATTATTAGCATAGGACAAGCAACATCAAGAA
CACAACACTAACATGAGCCCGTTTTAAGTCGAAGCAAACAACTGGGAACC
CTGTAGCCTGTAAGTTTCAGACATTTACAAAACAAACCAAGTTCCATATG
TGGCACCATTCCCACCCCAAATAAATAAACAAAAGCAAACTGGGGTGGAA
AAAATGTAAAGGCTTGATGCAGGTCCTTAATCAGCCTCTCCAATTGTCCT
TTCGCTTCCTTATCTCCCGGAGAGCTTCAATGGGATCATTGAAACCAACC
AACTCCTGAAGCTCTGGTAGATCAACACGCATGAAGGGGTTCGTCTCCAA
CTCTTCCTCAATGGTTGAGGGAATGGTTGGCAAGCCAGCTTGCTGCTGGT
TCTGAGCCCACGCCAATTTTTGCTGTAGCTTCACATTGCTTGGTTCGACA
GTAAGAGCAAATAGTAGGTTCTTCACTGTGTACTCATGGCCACAGTAAAC
TTGAGTTGGCTGAGGTAATGAGCCCAATGTCACGCACGGGGATTGATACA
TCTGTTCTG
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