CF834777

Overview
NameCF834777
Unique NameCF834777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:472..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHORT (Hydroxyacylglutathione hydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=gloB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.390e-13
Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKDNW 577
            L +LP  T V+CGHEYT  N+ FALT++P N               AG PT+P+ + +E  +NPF+R D  + QE  G    DP+E     R +KD++
Sbjct:  159 LRALPAQTLVFCGHEYTQPNITFALTIDPRNEALRARALEVDALRAAGRPTVPAFLGDEARSNPFLRADSADFQEAFGMTGADPVEVFARTRLKKDHF 256          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_THEEB (Hydroxyacylglutathione hydrolase OS=Thermosynechococcus elongatus (strain BP-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.372e-13
Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 577
            L  LP+ T+V+C HEYT KNL FALTVE  N                G  TIPSTI  E  TNPF+R ++  +Q  VG   P++    +R ++D +
Sbjct:  157 LRQLPEETRVWCAHEYTQKNLSFALTVEADNPTLQERYAQVCRDRAQGKATIPSTIGLEKATNPFLRCEVRSIQIAVGATTPLQTFTRLRGKRDQY 252          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_PSYIN (Hydroxyacylglutathione hydrolase OS=Psychromonas ingrahamii (strain 37) GN=gloB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.372e-13
Identity = 45/112 (40.18%), Postives = 60/112 (53.57%), Query Frame = -3
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVD----LPELQELVG--FNDPIEALREIRKRKDNW 607
            EQM+++    L  LP+ T+VYC HEYT  NL+FA  +EP N                G PTIPSTI  E E NPF+R      + +LQ  +G   NDP+     +R+ KDN+
Sbjct:  146 EQMFKAVS-RLALLPENTKVYCAHEYTQNNLIFAHQIEPKNKALLNYIQQVSKKRQQGQPTIPSTIGLEKEINPFLRCQQQTVINKLQSHLGKELNDPLSCFSALRQYKDNF 256          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_JANSC (Hydroxyacylglutathione hydrolase OS=Jannaschia sp. (strain CCS1) GN=gloB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.098e-13
Identity = 41/98 (41.84%), Postives = 52/98 (53.06%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKDNW 577
            L  LP  T V  GHEYT  N  FALT+EP N               AG PT+PST+ EEL TNPF+R D P +   +     DP++    IR +KD++
Sbjct:  159 LKMLPPGTLVCSGHEYTASNARFALTIEPDNPDLIFRVERITAARAAGQPTVPSTLAEELATNPFLRADAPTVAAPLDMEGADPVDVFTRIRAQKDSF 256          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_HALHL (Hydroxyacylglutathione hydrolase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=gloB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.098e-13
Identity = 38/74 (51.35%), Postives = 45/74 (60.81%), Query Frame = -3
Query:  356 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQ 577
            L +LP  T+V CGHEYTVKNL FA   +P N               AG PT+PST+ EEL TNPF+R D PEL+
Sbjct:  154 LAALPADTRVCCGHEYTVKNLEFAHCADPKNDRLAQRLQAARDARAAGQPTVPSTLAEELATNPFLRTDCPELR 227          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP7 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 7424) GN=gloB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.098e-13
Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 577
            L +LP  T+++C HEYT+ NL FALTVEP N+               G  T+PS +  E  TNPF+R D   ++  +G  D ++    +R +KDN+
Sbjct:  162 LRALPDNTRIWCAHEYTLNNLKFALTVEPENIDLQNRFSDVKIARSEGEATVPSLLGIEKLTNPFLRWDTQAIKSAMGSQDSVQVFGRLRGKKDNF 257          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHOPS (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain BisB5) GN=gloB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.046e-13
Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = -3
Query:  293 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGF--NDPIEALREIRKRKDN 577
            L  LP   ++YCGHEYT  N+ FALT+EP N               AG PTIP T+ EE + N F+R D+P +   VG       +   E+R+RK+N
Sbjct:  158 LRELPDDFKLYCGHEYTASNVKFALTIEPDNAALQARAKQVEQQRAAGQPTIPVTLGEEKQANLFLRADVPSVAAAVGLPGESAADVFGELRERKNN 254          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_MARMM (Hydroxyacylglutathione hydrolase OS=Maricaulis maris (strain MCS10) GN=gloB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.046e-13
Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGF--NDPIEALREIRKRKDNW 577
            L +LP  T++YC HEYT  N  FAL+++P N                G PT+P+TI  E   NPF+R D P ++  +G   +D  E   EIR+RKD++
Sbjct:  159 LAALPDETRIYCAHEYTEANARFALSIDPDNHDLQVYAAMVEGERARGEPTVPTTIAAEKAANPFLRPDDPAIRARLGMEHDDDEEVFAEIRRRKDSF 256          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_NOSP7 (Hydroxyacylglutathione hydrolase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gloB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.901e-13
Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 577
            L SLP  T+++C HEYT+KNL FALTV+  N                G  TIPS +  E  TNPF+R D   LQ  V  +D ++    IR+ K+N+
Sbjct:  162 LRSLPDNTRIWCAHEYTLKNLQFALTVDGDNADLQRRFNEVKAYRSRGEATIPSLLGVEKHTNPFLRWDQASLQSTVKSSDGVQTFARIREMKNNF 257          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_ALHEH (Hydroxyacylglutathione hydrolase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.901e-13
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = -3
Query:  296 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELV------GFNDPIEALREIRKRKD 607
            EQMY S    L +LP+ T+VYCGHEYT+ NL FA  VEP N                G PT+PS + +E  TNPF+R  LP ++           ++P+     +R+ KD
Sbjct:  146 EQMYAS-LGKLAALPEATRVYCGHEYTLANLRFAHQVEPDNPNLTQRLRQAEAARQRGEPTVPSRMADEHATNPFLRAHLPAVRTAAERWSGQTLDEPVAVFAALRRWKD 254          
The following BLAST results are available for this feature:
BLAST of CF834777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
GLO2_RHORT1.390e-1338.78Hydroxyacylglutathione hydrolase OS=Rhodospirillum... [more]
GLO2_THEEB2.372e-1340.63Hydroxyacylglutathione hydrolase OS=Thermosynechoc... [more]
GLO2_PSYIN2.372e-1340.18Hydroxyacylglutathione hydrolase OS=Psychromonas i... [more]
GLO2_JANSC3.098e-1341.84Hydroxyacylglutathione hydrolase OS=Jannaschia sp.... [more]
GLO2_HALHL3.098e-1351.35Hydroxyacylglutathione hydrolase OS=Halorhodospira... [more]
GLO2_CYAP73.098e-1337.50Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_RHOPS4.046e-1340.21Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_MARMM4.046e-1338.78Hydroxyacylglutathione hydrolase OS=Maricaulis mar... [more]
GLO2_NOSP76.901e-1340.63Hydroxyacylglutathione hydrolase OS=Nostoc punctif... [more]
GLO2_ALHEH6.901e-1338.18Hydroxyacylglutathione hydrolase OS=Alkalilimnicol... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834777 ID=CF834777; Name=CF834777; organism=Citrus sinensis; type=EST; length=609bp
TTTTTTTTTTTTTTTTCCTCTAATAAAACACTGAGATCAGGGAACTTATA
ACAATTCCAACATTTCATCATTATTAGCATAGGACAAGCAACATCAAGAA
CACAACACTAACATGAGCCCGTTTTAAGTCGAAGCAAACAACTGGGAACC
CTGTAGCCTGTAAGTTTCAGACATTTACAAAACAAACCAAGTTCCATATG
TGGCACCATTCCCACCCCAAATAAATAAACAAAAGCAAACTGGGGTGGAA
AAAATGTAAAGGCTTGATGCAGGTCCTTAATCAGCCTCTCCAATTGTCCT
TTCGCTTCCTTATCTCCCGGAGAGCTTCAATGGGATCATTGAAACCAACC
AACTCCTGAAGCTCTGGTAGATCAACACGCATGAAGGGGTTCGTCTCCAA
CTCTTCCTCAATGGTTGAGGGAATGGTTGGCAAGCCAGCTTGCTGCTGGT
TCTGAGCCCACGCCAATTTTTGCTGTAGCTTCACATTGCTTGGTTCGACA
GTAAGAGCAAATAGTAGGTTCTTCACTGTGTACTCATGGCCACAGTAAAC
TTGAGTTGGCTGAGGTAATGAGCCCAATGTCACGCACGGGGATTGATACA
TCTGTTCTG
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