CF834777

Overview
NameCF834777
Unique NameCF834777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:472..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_TRIEI (Hydroxyacylglutathione hydrolase OS=Trichodesmium erythraeum (strain IMS101) GN=gloB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.013e-13
Identity = 37/96 (38.54%), Postives = 51/96 (53.12%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 577
            L +LP  T+++C HEYT+KNL FA+TV+  N                   T+PS I  E  TNPF+R + P LQ  V   DP++    +R RKD +
Sbjct:  162 LRNLPDNTRIWCAHEYTLKNLQFAITVDKDNTDLQSRWAEVKTARGRNEATVPSMIGVEKRTNPFLRWEQPALQLAVQSQDPVQTFARLRGRKDRF 257          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_SILPO (Hydroxyacylglutathione hydrolase OS=Silicibacter pomeroyi GN=gloB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.013e-13
Identity = 43/108 (39.81%), Postives = 55/108 (50.93%), Query Frame = -3
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKDNW 607
            +QM+ S    L +LP  T V  GHEYT  N  FAL+V+P N                G PT+PS +  E  TNPF+R   P +Q L+G    DP     EIR RKD++
Sbjct:  149 DQMWAS-LSKLAALPDDTLVCSGHEYTQSNARFALSVDPDNAALKTRAAEIDQARAEGRPTVPSLLSLEKSTNPFLRAADPGIQSLLGMQGADPARVFAEIRARKDHF 255          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHOPA (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris GN=gloB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.013e-13
Identity = 39/97 (40.21%), Postives = 51/97 (52.58%), Query Frame = -3
Query:  293 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGF--NDPIEALREIRKRKDN 577
            L +LP   ++YCGHEYT  N+ FAL +EP N                G PTIP T+ EE + N F+R D+P +   VG       E   EIR+RK+N
Sbjct:  158 LRALPDDFKLYCGHEYTASNVKFALGIEPDNAALQARAKQVESLRAEGKPTIPVTLGEEKQANVFLRADVPSVAAAVGMPGAPAAEVFGEIRERKNN 254          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_ACAM1 (Hydroxyacylglutathione hydrolase OS=Acaryochloris marina (strain MBIC 11017) GN=gloB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.537e-12
Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 577
            L +LP+ T+V+C HEYT+KNL FALTV+  N                  PT+PS I  E +TNPF+R D P L      N P++    +R  KD +
Sbjct:  162 LRNLPETTRVWCAHEYTLKNLQFALTVDSDNSHLKNRFKQVQNARNLSQPTVPSDIGLEKQTNPFLRWDQPHLIIHTKSNTPVQCFARLRGMKDQF 257          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_PHOPR (Hydroxyacylglutathione hydrolase OS=Photobacterium profundum GN=gloB PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.622e-12
Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = -3
Query:  290 QMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELV---GFND-PIEALREIRKRKDNW 604
            QM+QS    L +LP  T++YC HEYT  NL FAL  E  N                G+ TIPST+ +E   NPF+R + P +++ V    F+D  +E    +R+ KDN+
Sbjct:  145 QMFQS-LKKLAALPDETEIYCAHEYTSSNLAFALVAEQDNPHLQRYREDVSRMRAQGISTIPSTLRQEKLVNPFLRCEQPSIKKSVADKAFDDSDLETFAALRRWKDNF 252          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_NITEU (Hydroxyacylglutathione hydrolase OS=Nitrosomonas europaea GN=gloB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.622e-12
Identity = 39/114 (34.21%), Postives = 56/114 (49.12%), Query Frame = -3
Query:  284 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVG------FNDPIEALREIRKRKDNWRG 607
            +QM+ S    L  LP  TQVYC HEYT+ N+ FA  ++P N                 +PT+PS++  E  TNPF+R + P + +           DP+     IR  K+N+RG
Sbjct:  144 QQMFDS-LQKLTDLPDETQVYCAHEYTLDNIRFARAIDPDNPELIELESNVEEKREQNMPTLPSSLAAEKATNPFLRCNQPAIIQSASRYAGRQLTDPVSVFAAIRDWKNNFRG 256          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BART1 (Hydroxyacylglutathione hydrolase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.425e-12
Identity = 39/98 (39.80%), Postives = 52/98 (53.06%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPI--EALREIRKRKDNW 577
            L  LP  T +YCGHEYT  N LFALT++P N                   T+P T+ +E  TNPF+R + P +++ +   D    E   EIRKRKDN+
Sbjct:  156 LCKLPDETLLYCGHEYTKNNALFALTLDPHNQKLQQRAEEVLSLRAKNAMTLPVTLGQEKATNPFLRWNDPAIRKNLSMKDSTDEEVFAEIRKRKDNF 253          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_SHEHH (Hydroxyacylglutathione hydrolase OS=Shewanella halifaxensis (strain HAW-EB4) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = -3
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN------DPIEALREIRKRKDNW 607
            EQMYQS    L  LP  T+V+C HEYT+ NL FA  VE +N                  PT+PS+I  E   NPF+R+D  E+Q+ +         DP+++   +R+ KDN+
Sbjct:  148 EQMYQS-LTQLSLLPDNTRVFCAHEYTLANLHFAKAVEANNPALIEYTVKAHALRAENKPTLPSSIALEKAINPFLRLDSLEIQKSLAVQFQQPIADPVQSFALLRQWKDNF 258          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHOS5 (Hydroxyacylglutathione hydrolase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 39/98 (39.80%), Postives = 50/98 (51.02%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND--PIEALREIRKRKDNW 577
            L +LP  T +  GHEYT  N  FA T+EP N                G PT+PS + +E+ TNPF+R     L+  VG  D    E   EIR+RKDN+
Sbjct:  158 LSALPADTLICSGHEYTQANARFACTLEPENPVLIFRVGSIAAARKEGRPTVPSQLSDEIATNPFLRAGEAALKAAVGMADAEDAEVFAEIRRRKDNF 255          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_XANC5 (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.842e-12
Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = -3
Query:  287 QMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVG------FNDPIEALREIRKRKDNWR 604
            QM+ S    L SLP  T V CGHEYT+ N  FAL V+P+N               A  PT+P +++ EL TNPF+R   PE++  V        +  ++   E+R+ KD +R
Sbjct:  144 QMFDS-LQRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRTGRPEIRAAVAPRAAGELSSEVDVFAELRRWKDEFR 254          
The following BLAST results are available for this feature:
BLAST of CF834777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
GLO2_TRIEI9.013e-1338.54Hydroxyacylglutathione hydrolase OS=Trichodesmium ... [more]
GLO2_SILPO9.013e-1339.81Hydroxyacylglutathione hydrolase OS=Silicibacter p... [more]
GLO2_RHOPA9.013e-1340.21Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_ACAM11.537e-1239.58Hydroxyacylglutathione hydrolase OS=Acaryochloris ... [more]
GLO2_PHOPR2.622e-1237.61Hydroxyacylglutathione hydrolase OS=Photobacterium... [more]
GLO2_NITEU2.622e-1234.21Hydroxyacylglutathione hydrolase OS=Nitrosomonas e... [more]
GLO2_BART13.425e-1239.80Hydroxyacylglutathione hydrolase OS=Bartonella tri... [more]
GLO2_SHEHH4.473e-1237.50Hydroxyacylglutathione hydrolase OS=Shewanella hal... [more]
GLO2_RHOS54.473e-1239.80Hydroxyacylglutathione hydrolase OS=Rhodobacter sp... [more]
GLO2_XANC55.842e-1236.61Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834777 ID=CF834777; Name=CF834777; organism=Citrus sinensis; type=EST; length=609bp
TTTTTTTTTTTTTTTTCCTCTAATAAAACACTGAGATCAGGGAACTTATA
ACAATTCCAACATTTCATCATTATTAGCATAGGACAAGCAACATCAAGAA
CACAACACTAACATGAGCCCGTTTTAAGTCGAAGCAAACAACTGGGAACC
CTGTAGCCTGTAAGTTTCAGACATTTACAAAACAAACCAAGTTCCATATG
TGGCACCATTCCCACCCCAAATAAATAAACAAAAGCAAACTGGGGTGGAA
AAAATGTAAAGGCTTGATGCAGGTCCTTAATCAGCCTCTCCAATTGTCCT
TTCGCTTCCTTATCTCCCGGAGAGCTTCAATGGGATCATTGAAACCAACC
AACTCCTGAAGCTCTGGTAGATCAACACGCATGAAGGGGTTCGTCTCCAA
CTCTTCCTCAATGGTTGAGGGAATGGTTGGCAAGCCAGCTTGCTGCTGGT
TCTGAGCCCACGCCAATTTTTGCTGTAGCTTCACATTGCTTGGTTCGACA
GTAAGAGCAAATAGTAGGTTCTTCACTGTGTACTCATGGCCACAGTAAAC
TTGAGTTGGCTGAGGTAATGAGCCCAATGTCACGCACGGGGATTGATACA
TCTGTTCTG
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