CF834777

Overview
NameCF834777
Unique NameCF834777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:472..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_XYLFT (Hydroxyacylglutathione hydrolase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12
Identity = 38/102 (37.25%), Postives = 53/102 (51.96%), Query Frame = -3 
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN------DPIEALREIRKRKDNW 577
            L +LP  T+V CGHEYT+ N  FAL V+P+N               AGLPT+P ++E EL TNPF+R   P +      +      D +E    +R  K+N+
Sbjct:  151 LAALPIQTRVCCGHEYTLSNAAFALHVDPTNTALQKRRQQANAMRLAGLPTLPISLESELNTNPFLRTAAPTIHAATATHLQRTPIDEVEVFATLRHWKNNF 252
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_XYLFM (Hydroxyacylglutathione hydrolase OS=Xylella fastidiosa (strain M12) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12
Identity = 38/102 (37.25%), Postives = 53/102 (51.96%), Query Frame = -3 
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN------DPIEALREIRKRKDNW 577
            L +LP  T+V CGHEYT+ N  FAL V+P+N               AGLPT+P ++E EL TNPF+R   P +      +      D +E    +R  K+N+
Sbjct:  151 LAALPIQTRVCCGHEYTLSNAAFALHVDPTNTALQKRRQQANAMRLAGLPTLPISLESELNTNPFLRTAAPTIHAATATHLQRTPIDEVEVFATLRHWKNNF 252
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_XYLF2 (Hydroxyacylglutathione hydrolase OS=Xylella fastidiosa (strain M23) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12
Identity = 38/102 (37.25%), Postives = 53/102 (51.96%), Query Frame = -3 
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN------DPIEALREIRKRKDNW 577
            L +LP  T+V CGHEYT+ N  FAL V+P+N               AGLPT+P ++E EL TNPF+R   P +      +      D +E    +R  K+N+
Sbjct:  151 LAALPIQTRVCCGHEYTLSNAAFALHVDPTNTALQKRRQQANAMRLAGLPTLPISLESELNTNPFLRTAAPTIHAATATHLQRTPIDEVEVFATLRHWKNNF 252
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_XANAC (Hydroxyacylglutathione hydrolase OS=Xanthomonas axonopodis pv. citri GN=gloB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12
Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = -3 
Query:  287 QMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELV------GFNDPIEALREIRKRKDNWR 604
            QM+ S    L SLP  T V CGHEYT+ N  FAL V+P+N               A  PT+P +++ EL TNPF+R   PE++  V        +  ++   E+R+ KD +R
Sbjct:  144 QMFDS-LQRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRTSHPEIRAAVAPRAASALSSEVDIFAELRRWKDEFR 254
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_METFK (Hydroxyacylglutathione hydrolase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12
Identity = 40/107 (37.38%), Postives = 57/107 (53.27%), Query Frame = -3 
Query:  290 QMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPEL--QELVGFNDPIEALREIRKRKDNW 604
            QMY S    L  LP  T+VYCGHEYT +NL FAL++EP +                GLP++PS++  EL TNPF+R   P +         DP+     IR+ ++++
Sbjct:  145 QMYSS-LQQLAQLPVNTRVYCGHEYTERNLAFALSLEPHHEALLSRREATAALRAQGLPSLPSSMALELATNPFLRCHEPGIIAASKSAATDPVSVFAAIREMRNHF 250
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2N_ARATH (Hydroxyacylglutathione hydrolase 2, mitochondrial OS=Arabidopsis thaliana GN=At2g31350 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12
Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = -3 
Query:  290 SLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMR---VDLPELQELVGFNDPIEALREIRKRKDNW 571
            SLP  T +YCGHEYT+ N  FAL++EP+N                 LPTIP+T++ E   NPF+R    D+     +    D  EAL  IRK KD++
Sbjct:  228 SLPDDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRIPEAADEAEALGIIRKAKDDF 324
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_SHEAM (Hydroxyacylglutathione hydrolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12
Identity = 43/111 (38.74%), Postives = 54/111 (48.65%), Query Frame = -3 
Query:  290 QMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN------DPIEALREIRKRKDNW 604
            Q+Y S    L SLP  T VYC HEYT+ NL FAL VEP N               A  P++PST+  E   NPF+RVD   +   V         D +  L  +R+ KDN+
Sbjct:  149 QLYDS-LAKLASLPDDTLVYCAHEYTLSNLRFALAVEPQNQCLQDYVKQVNNLREANKPSLPSTLGTEKAINPFLRVDTATVHAAVAAQAGQKVPDEVTCLALLRRWKDNF 258
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_PSEHT (Hydroxyacylglutathione hydrolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12
Identity = 45/114 (39.47%), Postives = 57/114 (50.00%), Query Frame = -3 
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELV--------GFNDPIEALREIRKRKDNW 607
            EQM+ S    L  LP   +VYC HEYT  NL FA  +EP N                   T+PSTI +EL+ NPFMR DLP + EL+          N+P E    +RK KD++
Sbjct:  145 EQMWHS-FNKLRELPADCKVYCTHEYTQANLAFATAIEPRNPELLAYSKRVDELRSKNEITLPSTIGQELKINPFMRSDLPNITELLPKEFCSVTKNNEPWENFAGLRKFKDHF 257
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_GLOVI (Hydroxyacylglutathione hydrolase OS=Gloeobacter violaceus GN=gloB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12
Identity = 37/96 (38.54%), Postives = 49/96 (51.04%), Query Frame = -3 
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 577
            L  LP  TQV+C HEYT+ NL FA T+EP N                 + T+PST+  E  TNPF+R +  +LQ   G  +P E    +R  KD +
Sbjct:  157 LRELPGETQVWCAHEYTLGNLRFAHTLEPDNAELAERLRTVEVLRARKIATVPSTMAAERATNPFLRWESRQLQRAAGAIEPEEVFAHLRALKDRF 252
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_XANCP (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris GN=gloB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.301e-11
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = -3 
Query:  287 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQEL------VGFNDPIEALREIRKRKDNWR 577
            L SLP  T V CGHEYT+ N  FAL V+P+N               A  PT+P +++ EL TNPF+R+  PE++        +     ++   E+R+ KD +R
Sbjct:  152 LASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRLHTPEIRAAAAAHASISITSDVDVFAELRRWKDAFR 254
The following BLAST results are available for this feature:
BLAST of CF834777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
GLO2_XYLFT7.630e-1237.25Hydroxyacylglutathione hydrolase OS=Xylella fastid... [more]
GLO2_XYLFM7.630e-1237.25Hydroxyacylglutathione hydrolase OS=Xylella fastid... [more]
GLO2_XYLF27.630e-1237.25Hydroxyacylglutathione hydrolase OS=Xylella fastid... [more]
GLO2_XANAC7.630e-1236.61Hydroxyacylglutathione hydrolase OS=Xanthomonas ax... [more]
GLO2_METFK7.630e-1237.38Hydroxyacylglutathione hydrolase OS=Methylobacillu... [more]
GLO2N_ARATH7.630e-1240.21Hydroxyacylglutathione hydrolase 2, mitochondrial ... [more]
GLO2_SHEAM9.965e-1238.74Hydroxyacylglutathione hydrolase OS=Shewanella ama... [more]
GLO2_PSEHT9.965e-1239.47Hydroxyacylglutathione hydrolase OS=Pseudoalteromo... [more]
GLO2_GLOVI9.965e-1238.54Hydroxyacylglutathione hydrolase OS=Gloeobacter vi... [more]
GLO2_XANCP1.301e-1135.92Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834777 ID=CF834777; Name=CF834777; organism=Citrus sinensis; type=EST; length=609bp
TTTTTTTTTTTTTTTTCCTCTAATAAAACACTGAGATCAGGGAACTTATA
ACAATTCCAACATTTCATCATTATTAGCATAGGACAAGCAACATCAAGAA
CACAACACTAACATGAGCCCGTTTTAAGTCGAAGCAAACAACTGGGAACC
CTGTAGCCTGTAAGTTTCAGACATTTACAAAACAAACCAAGTTCCATATG
TGGCACCATTCCCACCCCAAATAAATAAACAAAAGCAAACTGGGGTGGAA
AAAATGTAAAGGCTTGATGCAGGTCCTTAATCAGCCTCTCCAATTGTCCT
TTCGCTTCCTTATCTCCCGGAGAGCTTCAATGGGATCATTGAAACCAACC
AACTCCTGAAGCTCTGGTAGATCAACACGCATGAAGGGGTTCGTCTCCAA
CTCTTCCTCAATGGTTGAGGGAATGGTTGGCAAGCCAGCTTGCTGCTGGT
TCTGAGCCCACGCCAATTTTTGCTGTAGCTTCACATTGCTTGGTTCGACA
GTAAGAGCAAATAGTAGGTTCTTCACTGTGTACTCATGGCCACAGTAAAC
TTGAGTTGGCTGAGGTAATGAGCCCAATGTCACGCACGGGGATTGATACA
TCTGTTCTG
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