CF834777

Overview
NameCF834777
Unique NameCF834777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:472..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_XANCB (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris (strain B100) GN=gloB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.301e-11
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = -3
Query:  287 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQEL------VGFNDPIEALREIRKRKDNWR 577
            L SLP  T V CGHEYT+ N  FAL V+P+N               A  PT+P +++ EL TNPF+R+  PE++        +     ++   E+R+ KD +R
Sbjct:  152 LASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRLHTPEIRAAAAAHASISITSDVDVFAELRRWKDAFR 254          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_XANC8 (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=gloB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.301e-11
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = -3
Query:  287 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQEL------VGFNDPIEALREIRKRKDNWR 577
            L SLP  T V CGHEYT+ N  FAL V+P+N               A  PT+P +++ EL TNPF+R+  PE++        +     ++   E+R+ KD +R
Sbjct:  152 LASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRLHTPEIRAAAAAHASISITSDVDVFAELRRWKDAFR 254          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_ROSDO (Hydroxyacylglutathione hydrolase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gloB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.301e-11
Identity = 42/106 (39.62%), Postives = 53/106 (50.00%), Query Frame = -3
Query:  296 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKD 607
            +QM+ S    L +LP  TQVY GHEYT  N  FALT++P N               A  PT+PST+  E  TNPF+R   P ++  +        E   EIR RKD
Sbjct:  149 DQMWDS-LSKLAALPSETQVYSGHEYTAANARFALTIDPHNPDLISRSEGITAARAAAKPTVPSTLATEAATNPFLRAADPAIRAHLNMQHASDSEVFAEIRARKD 253          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_NITEC (Hydroxyacylglutathione hydrolase OS=Nitrosomonas eutropha (strain C91) GN=gloB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.301e-11
Identity = 38/103 (36.89%), Postives = 53/103 (51.46%), Query Frame = -3
Query:  287 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPEL----QELVG--FNDPIEALREIRKRKDNWR 577
            L SLP  T VYC HEYT+ N+ FA  ++P N                 +PT+PS++  E  TNPF+R D P +     + VG   NDP+     IR  K+N++
Sbjct:  153 LASLPDETLVYCAHEYTLANVRFARVLDPDNPDLIKLESTVEEKLKQNIPTLPSSLAVEKATNPFLRCDQPAIIHSASQHVGRHLNDPVSVFAAIRDWKNNFQ 255          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2M_ARATH (Hydroxyacylglutathione hydrolase 1, mitochondrial OS=Arabidopsis thaliana GN=GLX2-1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.301e-11
Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = -3
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND---PIEALREIRKRKDNW 607
            EQM  S    + SLP  T +YCG E T  NL FAL+VEP N                GLP+IP+T++ E   NPF+R+   ++++ +   D     EALR I++ +D +
Sbjct:  224 EQMLSS-LQKIVSLPDDTNIYCGRENTAGNLKFALSVEPKNETLQSYATRVAHLRSQGLPSIPTTVKVEKACNPFLRISSKDIRKSLSIPDSATEAEALRRIQRARDRF 331          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_VIBPA (Hydroxyacylglutathione hydrolase OS=Vibrio parahaemolyticus GN=gloB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.700e-11
Identity = 37/110 (33.64%), Postives = 58/110 (52.73%), Query Frame = -3
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVG----FNDPIEALREIRKRKDNW 607
            EQM++S    + +LP+ TQV+C HEYT  N+ FAL VEP N                 +PT+P+T+ +E   NPF+R   P++ + V      +DP      +R+ K+ +
Sbjct:  144 EQMFES-LSKIAALPEETQVFCAHEYTASNVAFALAVEPDNEQLRQYRDDVNRLRALNIPTLPTTLRKEKWINPFLRTTNPDVVKSVANRIKNSDPCSVFTALREWKNEF 252          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHIME (Hydroxyacylglutathione hydrolase OS=Rhizobium meliloti GN=gloB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.700e-11
Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = -3
Query:  290 EQMYQSPCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEA--LREIRKRKDNW 607
            + M+QS    L +LP  T +Y GHEYT+ N  FA+TV+P N                G  T P+T+  E  TNPF+R   P+++ L+G     +A    EIRKRKDN+
Sbjct:  150 DTMWQS-LSRLMALPDDTAIYFGHEYTLANAHFAITVDPENSALKERAAEIEETRSDGGFTAPTTMGLEKRTNPFLRAGDPKIRALLGMEKASDAAVFAEIRKRKDNF 256          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RALEJ (Hydroxyacylglutathione hydrolase OS=Ralstonia eutropha (strain JMP134) GN=gloB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 42/102 (41.18%), Postives = 51/102 (50.00%), Query Frame = -3
Query:  287 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELV-----GFNDPIEALREIRKRKDNWR 577
            L SLP  T+VYC HEYT  N+ FA  VEP N               AG PT+PSTI  E + NPF+R   P ++E V           EA   +R  KDN+R
Sbjct:  165 LASLPGETRVYCAHEYTRSNVRFARAVEPGNTALADWEARVESLREAGQPTVPSTIGLERQVNPFLRSREPTVREAVKAQGGSVAGDAEAFGALRGWKDNFR 266          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_HERAR (Hydroxyacylglutathione hydrolase OS=Herminiimonas arsenicoxydans GN=gloB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 40/105 (38.10%), Postives = 53/105 (50.48%), Query Frame = -3
Query:  287 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQE------LVGFND--PIEALREIRKRKDNWR 577
            L +LP  T+VYC HEYT+ NL FAL  EP N               A +PT+PSTI  E  TNPF+R   P + +       V  ND  P+     +R  K+++R
Sbjct:  155 LAALPDDTKVYCAHEYTISNLRFALAAEPDNAALAIRFKAEQAKREADIPTVPSTIGLEKSTNPFLRAREPAIADQLIAAGRVNENDKGPVAVFAALRAWKNDFR 259          
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHIEC (Hydroxyacylglutathione hydrolase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=gloB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11
Identity = 40/98 (40.82%), Postives = 51/98 (52.04%), Query Frame = -3
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQE--LVGFNDPIEALREIRKRKDNW 577
            L  LP  T VY GHEYT+ N  FALTV+P N                G  T+P+T+  E ETNPF+R   P ++   ++      E   EIRKRKDN+
Sbjct:  159 LAVLPDETAVYFGHEYTLSNARFALTVDPDNERLKSRAAEIEALRAEGKFTVPTTLGLEKETNPFLRAADPAIRRHLIMEGKTNEEVFAEIRKRKDNF 256          
The following BLAST results are available for this feature:
BLAST of CF834777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
GLO2_XANCB1.301e-1135.92Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_XANC81.301e-1135.92Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_ROSDO1.301e-1139.62Hydroxyacylglutathione hydrolase OS=Roseobacter de... [more]
GLO2_NITEC1.301e-1136.89Hydroxyacylglutathione hydrolase OS=Nitrosomonas e... [more]
GLO2M_ARATH1.301e-1136.70Hydroxyacylglutathione hydrolase 1, mitochondrial ... [more]
GLO2_VIBPA1.700e-1133.64Hydroxyacylglutathione hydrolase OS=Vibrio parahae... [more]
GLO2_RHIME1.700e-1138.89Hydroxyacylglutathione hydrolase OS=Rhizobium meli... [more]
GLO2_RALEJ2.220e-1141.18Hydroxyacylglutathione hydrolase OS=Ralstonia eutr... [more]
GLO2_HERAR2.220e-1138.10Hydroxyacylglutathione hydrolase OS=Herminiimonas ... [more]
GLO2_RHIEC2.899e-1140.82Hydroxyacylglutathione hydrolase OS=Rhizobium etli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834777 ID=CF834777; Name=CF834777; organism=Citrus sinensis; type=EST; length=609bp
TTTTTTTTTTTTTTTTCCTCTAATAAAACACTGAGATCAGGGAACTTATA
ACAATTCCAACATTTCATCATTATTAGCATAGGACAAGCAACATCAAGAA
CACAACACTAACATGAGCCCGTTTTAAGTCGAAGCAAACAACTGGGAACC
CTGTAGCCTGTAAGTTTCAGACATTTACAAAACAAACCAAGTTCCATATG
TGGCACCATTCCCACCCCAAATAAATAAACAAAAGCAAACTGGGGTGGAA
AAAATGTAAAGGCTTGATGCAGGTCCTTAATCAGCCTCTCCAATTGTCCT
TTCGCTTCCTTATCTCCCGGAGAGCTTCAATGGGATCATTGAAACCAACC
AACTCCTGAAGCTCTGGTAGATCAACACGCATGAAGGGGTTCGTCTCCAA
CTCTTCCTCAATGGTTGAGGGAATGGTTGGCAAGCCAGCTTGCTGCTGGT
TCTGAGCCCACGCCAATTTTTGCTGTAGCTTCACATTGCTTGGTTCGACA
GTAAGAGCAAATAGTAGGTTCTTCACTGTGTACTCATGGCCACAGTAAAC
TTGAGTTGGCTGAGGTAATGAGCCCAATGTCACGCACGGGGATTGATACA
TCTGTTCTG
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