CF834777

Overview
NameCF834777
Unique NameCF834777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:472..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BRUME (Hydroxyacylglutathione hydrolase OS=Brucella melitensis GN=gloB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = -3 
Query:  296 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 577
            L +LP  T +YCGHEYT  N  FALT++P N                   T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:  160 LVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 255
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BRUMB (Hydroxyacylglutathione hydrolase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = -3 
Query:  296 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 577
            L +LP  T +YCGHEYT  N  FALT++P N                   T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:  163 LVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 258
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BRUC2 (Hydroxyacylglutathione hydrolase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = -3 
Query:  296 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 577
            L +LP  T +YCGHEYT  N  FALT++P N                   T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:  163 LVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 258
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BRUAB (Hydroxyacylglutathione hydrolase OS=Brucella abortus GN=gloB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = -3 
Query:  296 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 577
            L +LP  T +YCGHEYT  N  FALT++P N                   T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:  160 LVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 255
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BRUA2 (Hydroxyacylglutathione hydrolase OS=Brucella abortus (strain 2308) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = -3 
Query:  296 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 577
            L +LP  T +YCGHEYT  N  FALT++P N                   T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:  160 LVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 255
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BRUA1 (Hydroxyacylglutathione hydrolase OS=Brucella abortus (strain S19) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = -3 
Query:  296 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 577
            L +LP  T +YCGHEYT  N  FALT++P N                   T+PSTI  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:  163 LVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQDAPDEAVFAEIRKRKD 258
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_BARHE (Hydroxyacylglutathione hydrolase OS=Bartonella henselae GN=gloB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 38/98 (38.78%), Postives = 50/98 (51.02%), Query Frame = -3 
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPI--EALREIRKRKDNW 577
            L  LP  T +YCGHEYT  N LFALT++P N                   T+P T+ +E + NPF+R D   L++ +        E   EIRKRKDN+
Sbjct:  156 LRQLPDETLLYCGHEYTKSNALFALTLDPYNQKLQQRAEDVFLLRAKNAMTLPVTLGQEKKNNPFLRWDNRTLRKTLRMEKETDEEVFAEIRKRKDNF 253
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_SHEDO (Hydroxyacylglutathione hydrolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11
Identity = 36/102 (35.29%), Postives = 51/102 (50.00%), Query Frame = -3 
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVG------FNDPIEALREIRKRKDNW 577
            L SLP   ++YC HEYT  N+ FALTV P+N                 +P++PS +  EL  NPF+R    E++  V        ND ++    +RK KDN+
Sbjct:  157 LASLPAHCKIYCAHEYTQSNINFALTVTPNNPNLLQYASWVAKARADNIPSLPSFLSTELAVNPFLRCHTYEVKTAVASQFNTEINDELQTFTLLRKWKDNF 258
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_RHIL3 (Hydroxyacylglutathione hydrolase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11
Identity = 40/98 (40.82%), Postives = 50/98 (51.02%), Query Frame = -3 
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPI--EALREIRKRKDNW 577
            L  LP  T VY GHEYT+ N  FALTV+P N                G  TIP+T+  E ETNPF+R   P ++  +        E   EIRKRKD++
Sbjct:  159 LAVLPDETAVYFGHEYTLSNARFALTVDPDNERLKSRAAEIEALRADGKFTIPTTLGLEKETNPFLRAADPAIRRNLVMEGKTNEEVFAEIRKRKDHF 256
[Close]
BLAST of CF834777 vs. ExPASy Swiss-Prot
Match: GLO2_AGRT5 (Hydroxyacylglutathione hydrolase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gloB PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11
Identity = 41/98 (41.84%), Postives = 53/98 (54.08%), Query Frame = -3 
Query:  290 LGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVXXXXXXXXXXXXXXAGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEA--LREIRKRKDNW 577
            L +LP  T+VY GHEYT+ N  FALTV+P N               A   TIP+TI  E +TNP+MRV    ++  +G     +A    EIR RKDN+
Sbjct:  159 LMALPDDTRVYFGHEYTLSNARFALTVDPDNAVLRERAARVETARQANEFTIPTTIGLEKQTNPYMRVADAGIRRHLGLEGAADADVFAEIRTRKDNF 256
The following BLAST results are available for this feature:
BLAST of CF834777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
GLO2_BRUME6.459e-1142.71Hydroxyacylglutathione hydrolase OS=Brucella melit... [more]
GLO2_BRUMB6.459e-1142.71Hydroxyacylglutathione hydrolase OS=Brucella melit... [more]
GLO2_BRUC26.459e-1142.71Hydroxyacylglutathione hydrolase OS=Brucella canis... [more]
GLO2_BRUAB6.459e-1142.71Hydroxyacylglutathione hydrolase OS=Brucella abort... [more]
GLO2_BRUA26.459e-1142.71Hydroxyacylglutathione hydrolase OS=Brucella abort... [more]
GLO2_BRUA16.459e-1142.71Hydroxyacylglutathione hydrolase OS=Brucella abort... [more]
GLO2_BARHE6.459e-1138.78Hydroxyacylglutathione hydrolase OS=Bartonella hen... [more]
GLO2_SHEDO8.435e-1135.29Hydroxyacylglutathione hydrolase OS=Shewanella den... [more]
GLO2_RHIL38.435e-1140.82Hydroxyacylglutathione hydrolase OS=Rhizobium legu... [more]
GLO2_AGRT58.435e-1141.84Hydroxyacylglutathione hydrolase OS=Agrobacterium ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834777 ID=CF834777; Name=CF834777; organism=Citrus sinensis; type=EST; length=609bp
TTTTTTTTTTTTTTTTCCTCTAATAAAACACTGAGATCAGGGAACTTATA
ACAATTCCAACATTTCATCATTATTAGCATAGGACAAGCAACATCAAGAA
CACAACACTAACATGAGCCCGTTTTAAGTCGAAGCAAACAACTGGGAACC
CTGTAGCCTGTAAGTTTCAGACATTTACAAAACAAACCAAGTTCCATATG
TGGCACCATTCCCACCCCAAATAAATAAACAAAAGCAAACTGGGGTGGAA
AAAATGTAAAGGCTTGATGCAGGTCCTTAATCAGCCTCTCCAATTGTCCT
TTCGCTTCCTTATCTCCCGGAGAGCTTCAATGGGATCATTGAAACCAACC
AACTCCTGAAGCTCTGGTAGATCAACACGCATGAAGGGGTTCGTCTCCAA
CTCTTCCTCAATGGTTGAGGGAATGGTTGGCAAGCCAGCTTGCTGCTGGT
TCTGAGCCCACGCCAATTTTTGCTGTAGCTTCACATTGCTTGGTTCGACA
GTAAGAGCAAATAGTAGGTTCTTCACTGTGTACTCATGGCCACAGTAAAC
TTGAGTTGGCTGAGGTAATGAGCCCAATGTCACGCACGGGGATTGATACA
TCTGTTCTG
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