CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:208..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: HAGHL_CHICK (Hydroxyacylglutathione hydrolase-like protein OS=Gallus gallus GN=HAGHL PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.320e-40
Identity = 85/190 (44.74%), Postives = 118/190 (62.11%), Query Frame = 3
Query:   21 MVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGED-PAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            + PG++VYG   + +   TH+V   ++ + GA + V  L TPCHTKG + Y++      D PA+F+GDTLFV GCG+F EG+AEQMY +L   LG LP+ T+V+CGHE TV+NL FAL VE  N                 LPT+PST++EE   NPF+RV    +Q+  G  +P+E LR +R  KDN++
Sbjct:   69 LCPGLRVYGAD-ERIGALTHRVAPDEELTFGA-IRVRCLFTPCHTKGHMCYFMWEDGSLDAPALFSGDTLFVGGCGQFLEGTAEQMYTNLTQVLGDLPKETKVFCGHECTVRNLKFALKVEPENEAVKKKLAWARQRDDEDLPTVPSTLQEEFLYNPFLRVTEEAVQKFTGRKEPVEVLRALRTEKDNFK 256          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SCHMA (Probable hydroxyacylglutathione hydrolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.156e-36
Identity = 85/191 (44.50%), Postives = 112/191 (58.64%), Query Frame = 3
Query:   15 KEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            K+ + G+KVYGG  D + G T  V +G K  + A    ++     HT G I Y VT +   ++ AVFTGDTLF+ GCG+FFEG+AEQM+++L   L  LP  T+VYCGHEYTVKNL F LTVE  N                   ++P TI EEL TNP MRV  P++       DPI+A++ IR+ KD +
Sbjct:   51 KQGLEGLKVYGGD-DRIGGLTDTVSHGYKXRLVATSTFIAWLHHRHTTGHICYLVTEENSTKEGAVFTGDTLFLGGCGRFFEGTAEQMFKALIEVLSKLPTTTKVYCGHEYTVKNLEFGLTVEPKNEALKHRLEAVKRLRASNQASVPGTIGEELATNPLMRVSEPDVLAHAKTTDPIKAMKTIREEKDRF 240          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SYNJB (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. GN=gloB PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.574e-32
Identity = 78/195 (40.00%), Postives = 104/195 (53.33%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            R + E  P  +VYG  +D   + G T +++ G+       +  + L  P HT+G I+YY +    E   +F GDTLF  GCG+ FEG+ EQM  SL   L  LP+ T+V+C HEYT+ NL FALTV+  N                G PT+PSTI EE  TNPF+R D P LQ   G  DP+     +R  KD +
Sbjct:   64 RQLLERYPRARVYGSQVDRGRIPGQTVELKAGETVEFAGRLAKV-LFVPGHTRGHIAYYFS----ESGDLFCGDTLFAGGCGRLFEGTPEQMVGSLD-QLRQLPEATRVWCAHEYTLNNLRFALTVDGDNPDLQARYQQVAALRQTGSPTVPSTIGEERRTNPFLRWDQPALQAATGLQDPVRVFARLRGMKDQF 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SHEPA (Hydroxyacylglutathione hydrolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gloB PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.617e-30
Identity = 79/201 (39.30%), Postives = 107/201 (53.23%), Query Frame = 3
Query:    3 ERTMKEMVPGIKVYGGPLDNVKGCTHQ-VENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVG------FNDPIEALREIRKRKDNW 584
            E+ ++     I VYG   +N+ G  H  V NGD     A +N   +  P HT G I+Y +      +  +F GDTLF AGCG+ FEGSAEQMYQSL   LG LP  T+V C HEYT+ NL FA  VE  N                 LPT+PS+I +E   NPF+R D  E+ + +        N+P+++   +R+ KDN+
Sbjct:   70 EQLIRRFGAQIAVYGPQSENIIGVNHPIVANGDISLTNAGLNAKVIQLPGHTLGHIAYLI------EDVLFCGDTLFSAGCGRIFEGSAEQMYQSLS-ELGQLPDNTKVCCAHEYTIANLAFANRVEPNNAALIDYTKKAQALRAQNLPTLPSSIGQEKAINPFLRSDSEEICQSLSIQFQQPINNPLQSFSLLRQWKDNF 263          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_METCA (Hydroxyacylglutathione hydrolase OS=Methylococcus capsulatus GN=gloB PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.112e-30
Identity = 72/183 (39.34%), Postives = 105/183 (57.38%), Query Frame = 3
Query:   48 GPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKDNWRG 590
            G    + G    +++G++F +G+  +   L  P HT G ++++      +D A+F GDTLF  GCG+ FEGSAEQM++SL   L +LP  T+V+C HEYT  N  FA+T+E GN                G  T+PS + EEL TNPF+R + PE++  +G      +E   EIR+RKD +RG
Sbjct:   80 GDRHRIPGIDVALKDGEEFRLGS-ASARMLDVPGHTSGHVAFWFE----DDAALFCGDTLFALGCGRLFEGSAEQMWRSL-ERLRALPAETKVFCAHEYTQANARFAVTIEPGNAALRERVERVEALRREGAATVPSILSEELATNPFLRPESPEIRARLGLPGVPEVEVFAEIRRRKDVFRG 256          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_ACAM1 (Hydroxyacylglutathione hydrolase OS=Acaryochloris marina (strain MBIC 11017) GN=gloB PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.144e-30
Identity = 77/196 (39.29%), Postives = 103/196 (52.55%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGED-PAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            RT+ +  P   VYGG  D   + G  H ++ GD+ S  AH        P HT+  I+YY     GE+   +F GDTLF  GCG+ FEG+  QM  SL   L +LP+ T+V+C HEYT+KNL FALTV++ N                  PT+PS I  E +TNPF+R D P L      N P++    +R  KD +
Sbjct:   64 RTLLQAFPNTVVYGGEQDRGRIPGQQHFLKEGDQVSF-AHRRAEVYFVPGHTRAHIAYYFPPTTGEEWGELFCGDTLFAGGCGRLFEGTPAQMVDSLS-KLRNLPETTRVWCAHEYTLKNLQFALTVDSDNSHLKNRFKQVQNARNLSQPTVPSDIGLEKQTNPFLRWDQPHLIIHTKSNTPVQCFARLRGMKDQF 257          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: HAGHL_MOUSE (Hydroxyacylglutathione hydrolase-like protein OS=Mus musculus GN=Haghl PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.025e-30
Identity = 73/189 (38.62%), Postives = 108/189 (57.14%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGED-PAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRK 575
            +  ++PG+ V G   + +   T ++E+G+    GA ++V  L TP HT G +SY++   +  D PA+F+GD L VAGCG   E +A+QMYQSL  TLG+LP  T+V+CGHE+T+ NL FA  VE  N                 +PT+PST+ EEL  NPF+RV    ++   G   P + L  + + +
Sbjct:   66 LAHILPGLAVLGAD-ERICALTRRLEHGEGLQFGA-IHVRCLLTPGHTSGHMSYFLWEDDCPDSPALFSGDALSVAGCGWHLEDTAQQMYQSLAKTLGTLPPETKVFCGHEHTLSNLEFAQKVEPCNEHVQAKLSWAQERDDEDIPTVPSTLGEELMYNPFLRVTEDAVRAFTGQVAPAQVLEALCRER 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_ANAVT (Hydroxyacylglutathione hydrolase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gloB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.025e-30
Identity = 75/189 (39.68%), Postives = 104/189 (55.03%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            P +KVYGG  D  +    QV  + GD+      V  + +  P HT+  I+YY   +  + P  +F GDTLF  GCG+ FEG+  QM +SL   L SLP+ T+V+C HEYT+KNL FAL+V++ N                G+ T+PS +  E  TNPF+R + P LQ  V  NDP++    IR  KD +
Sbjct:   71 PQLKVYGGAEDKGRIPGQQVFLQPGDRVQFTDRVAEV-IFVPGHTRAHIAYYFPPQTADTPGELFCGDTLFAGGCGRLFEGTPAQMVESL-TKLRSLPENTRVWCAHEYTLKNLQFALSVDSENTELQKRFDEVKTKRSQGIATVPSLLGVEKLTNPFLRWEQPSLQSAVNSNDPVQTFARIRGLKDKF 257          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_ANASP (Hydroxyacylglutathione hydrolase OS=Anabaena sp. (strain PCC 7120) GN=gloB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.025e-30
Identity = 75/189 (39.68%), Postives = 104/189 (55.03%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            P +KVYGG  D  +    QV  + GD+      V  + +  P HT+  I+YY   +  + P  +F GDTLF  GCG+ FEG+  QM +SL   L SLP+ T+V+C HEYT+KNL FAL+V++ N                G+ T+PS +  E  TNPF+R + P LQ  V  NDP++    IR  KD +
Sbjct:   71 PQVKVYGGAKDQGRIPGQQVFLQPGDRVQFADRVAEV-IFVPGHTRAHIAYYFPPQTDDTPGELFCGDTLFAGGCGRLFEGTPAQMVESL-TKLRSLPENTRVWCAHEYTLKNLQFALSVDSKNTELQKRLDEVKTKRSQGIATVPSLLGVEKLTNPFLRWEQPSLQLAVNSNDPVQTFARIRGLKDKF 257          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO22_SCHPO (Probable hydroxyacylglutathione hydrolase C13B11.03c OS=Schizosaccharomyces pombe GN=SPCC13B11.03c PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29
Identity = 75/189 (39.68%), Postives = 106/189 (56.08%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKD 578
            +K+  P + +YGG   N  G +H +++ +   IG +V + +LHTPCHT+  I +Y       + AVFTGDTLF AGCG+FFEG+A +M+ +L   L SLP  T +Y GHEYT  N+ FA                       G      T+ +E + NPFMRV  PELQ+ +G NDPI+ + E+R  K+
Sbjct:   75 LKKEFPHVTIYGGSDQN--GVSHVLQDKETLRIG-NVQIEALHTPCHTRDSICFYA--HSSNEHAVFTGDTLFNAGCGRFFEGTAAEMHIALNAVLSSLPNNTVIYPGHEYTKSNVKFASKHLQSEALNHLEGLCNHNQFIAG----HITMGQEKQFNPFMRVTDPELQKHLGLNDPIKVMDELRTLKN 254          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
HAGHL_CHICK1.320e-4044.74Hydroxyacylglutathione hydrolase-like protein OS=G... [more]
GLO2_SCHMA1.156e-3644.50Probable hydroxyacylglutathione hydrolase OS=Schis... [more]
GLO2_SYNJB8.574e-3240.00Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SHEPA1.617e-3039.30Hydroxyacylglutathione hydrolase OS=Shewanella pea... [more]
GLO2_METCA2.112e-3039.34Hydroxyacylglutathione hydrolase OS=Methylococcus ... [more]
GLO2_ACAM16.144e-3039.29Hydroxyacylglutathione hydrolase OS=Acaryochloris ... [more]
HAGHL_MOUSE8.025e-3038.62Hydroxyacylglutathione hydrolase-like protein OS=M... [more]
GLO2_ANAVT8.025e-3039.68Hydroxyacylglutathione hydrolase OS=Anabaena varia... [more]
GLO2_ANASP8.025e-3039.68Hydroxyacylglutathione hydrolase OS=Anabaena sp. (... [more]
GLO22_SCHPO1.048e-2939.68Probable hydroxyacylglutathione hydrolase C13B11.0... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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