CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_ECOLU (Hydroxyacylglutathione hydrolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.809e-21
Identity = 68/199 (34.17%), Postives = 100/199 (50.25%), Query Frame = 3
Query:   12 MKEMV---PGIKVYGGPLDNVKGCTHQVENGD-KFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVG----FNDPIEALREIRKRKDNW 584
            +KE+V   P I VYG      KG T  V++G+  F +G   +V++  TP HT G I Y+        P +F GDTLF  GCG+ FEG+  QMYQSL   L +LP  T V C HEYT+ N+ FAL++   ++                  T+P  ++ E + N F+R +  +L  ++        P E    +R +KD +
Sbjct:   62 VKELVKKFPQIVVYGPQETQDKGTTRVVKDGEIAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEERFAWLRSKKDRF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPW (Hydroxyacylglutathione hydrolase OS=Pseudomonas putida (strain W619) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.893e-21
Identity = 64/188 (34.04%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   30 GIKVYGGPLDNVKGCTHQVENGDKFS-IGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWRG 590
            G +V G   + +      ++ GD+ + +G    VL++  P HT G I+++    +   P +F+GDTLF AGCG+ FEG+ EQM  +L   L SLP+ T+VYC HEYT+ NL FA  VE  N                   T+PSTI  E  TNPF+R                 +   ++++ D W+G
Sbjct:   73 GARVSGPANERIPCRDLALDEGDEVTAVGVTFQVLAV--PGHTLGHIAFF--SDQPATPVLFSGDTLFAAGCGRMFEGTPEQMQPAL-ARLASLPERTEVYCAHEYTLSNLRFAKAVEPQNPHVLQRFDDVTRLRADNRITLPSTIGLERLTNPFLRT----------------SATLVKQKADEWKG 239          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_ECOUT (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain UTI89 / UPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.893e-21
Identity = 65/198 (32.83%), Postives = 98/198 (49.49%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVG----FNDPIEALREIRKRKDNW 584
            + + E  P I VYG      KG T  V++G+  F +G   +V++  TP HT G I Y+        P +F GDTLF  GCG+ FEG+  QMYQS+   L +LP  T V C HEYT+ N+ FAL++   ++                  T+P  ++ E + N F+R +  +L  ++        P E    +R +KD +
Sbjct:   63 KELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSI-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLKQPEERFAWLRSKKDRF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_ECOK1 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O1:K1 / APEC GN=gloB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.893e-21
Identity = 65/198 (32.83%), Postives = 98/198 (49.49%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVG----FNDPIEALREIRKRKDNW 584
            + + E  P I VYG      KG T  V++G+  F +G   +V++  TP HT G I Y+        P +F GDTLF  GCG+ FEG+  QMYQS+   L +LP  T V C HEYT+ N+ FAL++   ++                  T+P  ++ E + N F+R +  +L  ++        P E    +R +KD +
Sbjct:   63 KELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSI-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEERFAWLRSKKDRF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_ECO45 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.893e-21
Identity = 65/198 (32.83%), Postives = 98/198 (49.49%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVG----FNDPIEALREIRKRKDNW 584
            + + E  P I VYG      KG T  V++G+  F +G   +V++  TP HT G I Y+        P +F GDTLF  GCG+ FEG+  QMYQS+   L +LP  T V C HEYT+ N+ FAL++   ++                  T+P  ++ E + N F+R +  +L  ++        P E    +R +KD +
Sbjct:   63 KELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSI-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEERFAWLRSKKDRF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_RALME (Hydroxyacylglutathione hydrolase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gloB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.161e-20
Identity = 60/156 (38.46%), Postives = 77/156 (49.36%), Query Frame = 3
Query:   33 IKVYGGPLDNVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMR 497
            + V G   + +   T  V  GD  ++    V    L  P HT G ++Y V    G  P VF GDTLF +GCG+ FEG+  QM  SL   L +LP  T+VYC HEYT  N+ FA  VE  N                G PT+P+T+  E   NPF+R
Sbjct:   78 LPVIGPQGERIGHRTQAVREGDTVTLRHPAVTFRVLDVPGHTAGHVAY-VGDLPGAGPVVFCGDTLFASGCGRLFEGTPAQMLASL-DKLAALPGDTRVYCAHEYTRSNVRFAQAVEPANPDLAAWAARVDILREAGTPTVPTTVAHERAVNPFLR 231          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_YERE8 (Hydroxyacylglutathione hydrolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gloB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.517e-20
Identity = 66/195 (33.85%), Postives = 90/195 (46.15%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDP----IEALREIRKRKDNW 584
            ++   P I VYG      KG T  V  GD  SIG   N   +  P HT   I+YY        P +F GDTLF AGCG+ FEG+  QMY S+   L  LP  T +   HEYT+ NL FA  +   +                  P++P  ++ E + N F+R D  +LQ  +G   P    +    E+R +KD +
Sbjct:   65 LRRHFPEIPVYGPQETANKGATIMVTGGDHLSIGGQ-NYQVIAVPGHTLEHIAYY------SKPYLFCGDTLFSAGCGRLFEGTPAQMYASI-QQLAQLPDETLICSAHEYTLANLKFARFILPSDQDIATYQQQIMQLRAKNQPSLPVKLQIERKINVFLRCDDIDLQRKIGVISPPNSLVSVFSELRAQKDRF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_CITK8 (Hydroxyacylglutathione hydrolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gloB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.517e-20
Identity = 63/190 (33.16%), Postives = 92/190 (48.42%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLP----ELQELVGFNDPIEALREIRKRKDNW 584
            P + VYG      KG T  V++GD   +  H   +   TP HT G I Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   + +LP  T + C HEYT+ N+ FAL++   +                   T+P  ++ E + N F+R + P    E+ +      P E    +R +KD++
Sbjct:   70 PHVVVYGPAETQDKGTTRVVKDGDSALVLGHEFSI-FATPGHTLGHICYF------SHPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKISALPDDTLICCAHEYTLANMKFALSILPHDSFINEYYRKVNELRAKNQITLPVILKNERKNNIFLRTEDPDLINEINKETKLQQPEERFAWLRSKKDSF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_NITWN (Hydroxyacylglutathione hydrolase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=gloB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.981e-20
Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 3
Query:   81 QVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKD 578
            +V  GD   +G  +  + L TP HT   +SY       ++  VF  DTLF  GCG+ FEG+   M+ SL + L +LP   ++YCGHEYT  N+ FALT+E  N                G PT+P+ + EE + N F+R D P +   V       +E   E+R+RK+
Sbjct:   92 RVGQGDIIKVGTLLGRV-LETPGHTLDHVSYVFD----DEKVVFAADTLFSIGCGRVFEGTYPMMWDSL-LKLRALPDSFRLYCGHEYTDSNIKFALTIEPNNPVLKARAEEVTRLRAEGRPTVPTLMGEEKKANVFLRADDPAVAAGVHMKGASGVEVFAELRERKN 253          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_MARMS (Hydroxyacylglutathione hydrolase OS=Marinomonas sp. (strain MWYL1) GN=gloB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.981e-20
Identity = 61/186 (32.80%), Postives = 97/186 (52.15%), Query Frame = 3
Query:   48 GPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPEL-----QEL--VGFNDPIEALREIRKRKDNW 584
            GP    +  TH V++GD+  + + V  + + TP HT   + Y+    E E P + +GDTLF  GCG+  EG+ EQM  ++ + +  LP  T +Y  HEYT+ N  FAL++E  N                  PT+P+ +  E +TNPF+R  +  L     Q+L  +   +PI A  ++R+ KD++
Sbjct:   76 GPEHLTELVTHPVDDGDRILVFSKVFTV-IATPGHTLDHLCYF---SEQETPILLSGDTLFKGGCGRIMEGTHEQMLAAM-IKISGLPNDTLIYGTHEYTLANYRFALSLEPNNKDLIESNITCQKLRTEEKPTLPTKLSIEKKTNPFLRSHIEALKIQAAQQLNEIPAENPIGAFSQVRRAKDSF 256          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2_ECOLU6.809e-2134.17Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_PSEPW8.893e-2134.04Hydroxyacylglutathione hydrolase OS=Pseudomonas pu... [more]
GLO2_ECOUT8.893e-2132.83Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOK18.893e-2132.83Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO458.893e-2132.83Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_RALME1.161e-2038.46Hydroxyacylglutathione hydrolase OS=Ralstonia meta... [more]
GLO2_YERE81.517e-2033.85Hydroxyacylglutathione hydrolase OS=Yersinia enter... [more]
GLO2_CITK81.517e-2033.16Hydroxyacylglutathione hydrolase OS=Citrobacter ko... [more]
GLO2_NITWN1.981e-2035.71Hydroxyacylglutathione hydrolase OS=Nitrobacter wi... [more]
GLO2_MARMS1.981e-2032.80Hydroxyacylglutathione hydrolase OS=Marinomonas sp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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