CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_NITHX (Hydroxyacylglutathione hydrolase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=gloB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.087e-18
Identity = 59/168 (35.12%), Postives = 83/168 (49.40%), Query Frame = 3
Query:   81 QVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN--DPIEALREIRKRKD 578
            +V  GD   +G  +  + L TP HT   ISY       ++  VF  DTLF  GCG+  EG+   M+ SL + L +LP   ++YCGHEYT  N+ FALTVE  N                  PT+P+ + EE + N F+R D P +   V        +   E+R+RK+
Sbjct:   92 RVGQGDIVKVGTLLGRV-LETPGHTLDHISYVFD----DEKVVFAADTLFSIGCGRVIEGTYPMMWDSL-LKLRALPDDFRLYCGHEYTASNVKFALTVEPNNAALKARAEDVARLRAENKPTVPTLMGEEKKANVFLRADDPAVAAGVHMKGASGADVFGELRERKN 253          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SALAR (Hydroxyacylglutathione hydrolase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gloB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.420e-18
Identity = 62/190 (32.63%), Postives = 90/190 (47.37%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVD----LPELQELVGFNDPIEALREIRKRKDNW 584
            P + VYG      KG TH V +GD   +  + N     TP HT G I Y+        P +F GDTLF  GCG+ FEG+A QMYQSL + + +LP  T +   HEYT+ NL FAL++   +                   T+P  ++ E + N F+R +    + E+ +      P      +R +KD +
Sbjct:   70 PQMTVYGPTETQDKGATHLVGDGDTVLVLGY-NFSIFATPGHTLGHICYF------SHPYLFCGDTLFSGGCGRLFEGTALQMYQSL-MKINTLPDDTLICSAHEYTLANLKFALSILPHDSFINEYYRKVNELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQPEARFAWLRSKKDTF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_BUCAI (Hydroxyacylglutathione hydrolase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gloB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.422e-18
Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFND---PIEALREIRKRKDNW 584
            R + E  P I V+G       G    V +GD+  +   +  +   TP HT G +SYY        P +F GDTLF AGCG+ F+    +MY+S+ + + SLP  T + C HEYT+ NL F++ +   +                G  ++PS I  E + N F+R +   +++ +G        E  + +R +KD W
Sbjct:   63 RKIIEYFPKISVFGPKETRQHGVNKIVSHGDRIILLDKIFYV-FFTPGHTSGHVSYY------SQPYIFCGDTLFSAGCGRVFKNKHLEMYRSIKI-ISSLPDSTLLCCSHEYTLSNLQFSMFILPNDNFIKLYLKKIEIKLKLGQSSLPSYIFFEKKINLFLRTNDNYVKKSIGLKSTCTDFEVFKRLRLKKDFW 250          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_STRM5 (Hydroxyacylglutathione hydrolase OS=Stenotrophomonas maltophilia (strain R551-3) GN=gloB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.163e-18
Identity = 57/194 (29.38%), Postives = 96/194 (49.48%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKF-SIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFN------DPIEALREIRKRKDNWR 587
            PG++V     + +   T +V  G++  ++G   +VLS+  P HT+  I+++          +F+GD+LF  GCG+ FEG+  Q+  S+ + LG+LP    + C HEYTV N +FA  V+  N                   T+P T+  E + NPF+RV    ++  V  +      D ++ +  +R  KD +R
Sbjct:   69 PGVRVIAPVEERIPTATERVGEGERVQALGRMFHVLSV--PGHTRSHIAFHTAEH------LFSGDSLFSLGCGRLFEGTPSQLLASM-LKLGALPAQLLLCCAHEYTVSNAVFARHVDPANAALWQRQEEALAMRRDDRSTLPVTLANEFDCNPFLRVHTAPIRASVSAHLGRDVVDDVDVMAGLRHWKDGFR 253          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PSESM (Hydroxyacylglutathione hydrolase OS=Pseudomonas syringae pv. tomato GN=gloB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.163e-18
Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 3
Query:  144 PCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQE 521
            P HT G I++Y   ++   P +F+GDTLF AGCG+ FEG+  QM+ SL   L +LP  T +YC HEYT+ NL FA  VE  N                   ++PS++  E  TNPF+R     ++E
Sbjct:  110 PGHTLGHIAFY--HEDAAAPLLFSGDTLFAAGCGRLFEGTPGQMHASL-ERLAALPDSTLIYCAHEYTLSNLRFAQAVEPDNQDIAERLAQVTLMRSENRISLPSSLALEKRTNPFLRTRETSVKE 232          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_THICR (Hydroxyacylglutathione hydrolase OS=Thiomicrospira crunogena (strain XCL-2) GN=gloB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.131e-18
Identity = 54/152 (35.53%), Postives = 74/152 (48.68%), Query Frame = 3
Query:   66 KGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQE 521
            K  TH V+ GD+  +  +     + TP HT   I +Y         A+F+GDTLF  GCGK ++   EQM +SL + L +L     VYCGHEYT  NL FA   E                    +P +P+ +  E +TNPF+R D P L +
Sbjct:   86 KPVTHPVKEGDQVQV-LNETFQVIETPGHTDEHICFY------HPEALFSGDTLFTGGCGKIWQNPPEQMAESL-LKLRALNDDCMVYCGHEYTYANLNFAKIAEPNTPAILDRLAEVKTNTQRNIPCVPARLGLEKQTNPFLRFDHPPLMQ 229          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SALTI (Hydroxyacylglutathione hydrolase OS=Salmonella typhi GN=gloB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.131e-18
Identity = 60/190 (31.58%), Postives = 88/190 (46.32%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVD----LPELQELVGFNDPIEALREIRKRKDNW 584
            P + VYG      KG TH V +GD   +      L   TP HT G + Y+        P +F GDTLF  GCG+ FEG+  QMYQSL + + SLP  T +   HEYT+ N+ FAL++   +                   T+P  ++ E + N F+R +    + E+ +      P      +R +KD +
Sbjct:   70 PQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTL-FATPGHTLGHVCYF------SHPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-MKINSLPDDTLICSAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQPEARFAWLRSKKDTF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SALEP (Hydroxyacylglutathione hydrolase OS=Salmonella enteritidis PT4 (strain P125109) GN=gloB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.131e-18
Identity = 60/190 (31.58%), Postives = 88/190 (46.32%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVD----LPELQELVGFNDPIEALREIRKRKDNW 584
            P + VYG      KG TH V +GD   +      L   TP HT G + Y+        P +F GDTLF  GCG+ FEG+  QMYQSL + + SLP  T +   HEYT+ N+ FAL++   +                   T+P  ++ E + N F+R +    + E+ +      P      +R +KD +
Sbjct:   70 PQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTL-FATPGHTLGHVCYF------SHPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-MKINSLPDDTLICSAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQPEARFAWLRSKKDTF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SALDC (Hydroxyacylglutathione hydrolase OS=Salmonella dublin (strain CT_02021853) GN=gloB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.131e-18
Identity = 60/190 (31.58%), Postives = 88/190 (46.32%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVD----LPELQELVGFNDPIEALREIRKRKDNW 584
            P + VYG      KG TH V +GD   +      L   TP HT G + Y+        P +F GDTLF  GCG+ FEG+  QMYQSL + + SLP  T +   HEYT+ N+ FAL++   +                   T+P  ++ E + N F+R +    + E+ +      P      +R +KD +
Sbjct:   70 PQMTVYGPAETQDKGATHLVGDGDTIRVLGEKFTL-FATPGHTLGHVCYF------SHPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-MKINSLPDDTLICSAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETILQQPEARFAWLRSKKDTF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PROMS (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain AS9601) GN=gloB PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.131e-18
Identity = 63/201 (31.34%), Postives = 97/201 (48.26%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGG-------PLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            +++ E  P +KV          P  NV      VE+G+  +I G  V ++ +    HT   I++++ G   E+P +F GDTLF  GCG+ FEG+ +QMY SL   + SLP+ T +YC HEYT  N+L+AL ++  +                   TIP  ++EE++ N F+R               +E    +R  KD W
Sbjct:   68 KSLIEKWPNVKVIASSKEKKRIPFQNVS-----VEDGETLNILGEEVKIIEVLG--HTSSHIAFFLNG---ENPVLFIGDTLFSGGCGRIFEGTYQQMYSSL-ERIKSLPKNTLIYCAHEYTKANILWALNLKPKDQDIKNKLSEVEKKLSLNELTIPFLLDEEMKINLFLRA------------KNLEEFTFLRANKDLW 245          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2_NITHX1.087e-1835.12Hydroxyacylglutathione hydrolase OS=Nitrobacter ha... [more]
GLO2_SALAR1.420e-1832.63Hydroxyacylglutathione hydrolase OS=Salmonella ari... [more]
GLO2_BUCAI2.422e-1830.10Hydroxyacylglutathione hydrolase OS=Buchnera aphid... [more]
GLO2_STRM53.163e-1829.38Hydroxyacylglutathione hydrolase OS=Stenotrophomon... [more]
GLO2_PSESM3.163e-1839.68Hydroxyacylglutathione hydrolase OS=Pseudomonas sy... [more]
GLO2_THICR4.131e-1835.53Hydroxyacylglutathione hydrolase OS=Thiomicrospira... [more]
GLO2_SALTI4.131e-1831.58Hydroxyacylglutathione hydrolase OS=Salmonella typ... [more]
GLO2_SALEP4.131e-1831.58Hydroxyacylglutathione hydrolase OS=Salmonella ent... [more]
GLO2_SALDC4.131e-1831.58Hydroxyacylglutathione hydrolase OS=Salmonella dub... [more]
GLO2_PROMS4.131e-1831.34Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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