CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:208..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2N_ARATH (Hydroxyacylglutathione hydrolase 2, mitochondrial OS=Arabidopsis thaliana GN=At2g31350 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.511e-28
Identity = 76/190 (40.00%), Postives = 100/190 (52.63%), Query Frame = 3
Query:   30 GIKVYGGPLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMR---VDLPELQELVGFNDPIEALREIRKRKDNW 584
            G KV G  +D   + G    +++GDK+    H  V  + TP HTKG IS Y  G      A+FTGDT+F   CGK FEG+ +QM  SL   + SLP  T +YCGHEYT+ N  FAL++E  N                 LPTIP+T++ E   NPF+R    D+     +    D  EAL  IRK KD++
Sbjct:  141 GAKVIGSAMDKDRIPGIDMALKDGDKWMFAGH-EVHVMDTPGHTKGHISLYFPGSR----AIFTGDTMFSLSCGKLFEGTPKQMLASL-QKITSLPDDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRIPEAADEAEALGIIRKAKDDF 324          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_TRIEI (Hydroxyacylglutathione hydrolase OS=Trichodesmium erythraeum (strain IMS101) GN=gloB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.809e-28
Identity = 75/189 (39.68%), Postives = 98/189 (51.85%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKE-GEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            P +KVYGG  D  +    QV  + GD+      V  + L  P HT G I+YY      GE   +F GDTLF  GCG+ FEG+  QM  SL   L +LP  T+++C HEYT+KNL FA+TV+  N                   T+PS I  E  TNPF+R + P LQ  V   DP++    +R RKD +
Sbjct:   71 PQLKVYGGVEDRGRIPGQQVFLQEGDRVHFADRVGEV-LFVPGHTIGHIAYYFPSVAFGETGELFCGDTLFAGGCGRLFEGTPAQMVDSLN-KLRNLPDNTRIWCAHEYTLKNLQFAITVDKDNTDLQSRWAEVKTARGRNEATVPSMIGVEKRTNPFLRWEQPALQLAVQSQDPVQTFARLRGRKDRF 257          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PHOPR (Hydroxyacylglutathione hydrolase OS=Photobacterium profundum GN=gloB PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.185e-27
Identity = 71/195 (36.41%), Postives = 102/195 (52.31%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELV---GFND-PIEALREIRKRKDNW 584
            +K   P + V G   + + G +  VE+GD+  +      + L  P HT G ++Y   GK      +F GDTLF  GCG+ FEG+  QM+QSL   L +LP  T++YC HEYT  NL FAL  E  N                G+ TIPST+ +E   NPF+R + P +++ V    F+D  +E    +R+ KDN+
Sbjct:   66 LKRHYPNLNVVGPASEPIPGISQSVEDGDQVELFGE-RFMVLGVPGHTLGHVAYVGDGK------LFCGDTLFSVGCGRLFEGTPAQMFQSL-KKLAALPDETEIYCAHEYTSSNLAFALVAEQDNPHLQRYREDVSRMRAQGISTIPSTLRQEKLVNPFLRCEQPSIKKSVADKAFDDSDLETFAALRRWKDNF 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_MARMM (Hydroxyacylglutathione hydrolase OS=Maricaulis maris (strain MCS10) GN=gloB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.185e-27
Identity = 71/193 (36.79%), Postives = 102/193 (52.85%), Query Frame = 3
Query:   18 EMVPGIKVYGGPLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGF--NDPIEALREIRKRKDNW 584
            + + G KV     D   + G + +VE+GD  S+G H      +TP HT G + Y++      D   F GDTLF  GCG+ FEG+  +M+ SL   L +LP  T++YC HEYT  N  FAL+++  N                G PT+P+TI  E   NPF+R D P ++  +G   +D  E   EIR+RKD++
Sbjct:   70 QALTGAKVVAPRYDRHRIPGISMEVEDGDVISLGDH-KAKVFYTPGHTMGHVCYHMP----MDGIAFVGDTLFALGCGRLFEGTPAEMWHSLS-RLAALPDETRIYCAHEYTEANARFALSIDPDNHDLQVYAAMVEGERARGEPTVPTTIAAEKAANPFLRPDDPAIRARLGMEHDDDEEVFAEIRRRKDSF 256          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP4 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gloB PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.854e-27
Identity = 73/188 (38.83%), Postives = 97/188 (51.60%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            P   VYGG  D  +    QV  + GD+ +       + L  P HT+  I+YY          +F GDTLF  GCG+ FEG+  QM  SL   L  LP  T+V+C HEYT+KNL FALT+E  NV                 PT+PS +  E  TNPF+R D+P++Q+ V   D I+    +R RKD +
Sbjct:   71 PTAVVYGGAEDRGRIPGQQVFLQPGDRVNFAQRTAEV-LFVPGHTRAHIAYYFPPVNHSSGELFCGDTLFAGGCGRLFEGTPAQMVNSL-NQLRQLPDNTRVWCAHEYTLKNLQFALTIEPENVELQTRLAQVYLARQHFQPTVPSELGLEKRTNPFLRWDVPQVQQSVKGQDGIQTFTRLRGRKDQF 256          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_OCHA4 (Hydroxyacylglutathione hydrolase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gloB PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.728e-27
Identity = 77/187 (41.18%), Postives = 102/187 (54.55%), Query Frame = 3
Query:   30 GIKVYGGPLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFND-PIEAL-REIRKRKD 578
            G+ + G   +  K  G    V++GD+F+ G    V  + TP HT G +SYY+   +    AVFTGDTLF  GCG+ FEG+   M+QSL   L +LP  T VYCGHEYT  N  FALT++  N                   T+PS+I  E+ TNPF+R     ++  +G  D P EA+  EIRKRKD
Sbjct:   78 GVSIIGPKAEETKIPGIDRTVKDGDEFTFGLF-RVKVIATPGHTAGEVSYYLPDAK----AVFTGDTLFALGCGRLFEGTPLTMFQSL-QKLVALPGDTAVYCGHEYTESNARFALTIDPANSALKERAAEIARLRAADRMTLPSSIALEMATNPFLRWHDAGIRSRLGLQDAPDEAVFAEIRKRKD 258          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_NOSP7 (Hydroxyacylglutathione hydrolase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gloB PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.728e-27
Identity = 72/192 (37.50%), Postives = 100/192 (52.08%), Query Frame = 3
Query:   18 EMVPGIKVYGGPLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            E  P + VYGG  D   + G    ++ GD+      +  + +  P HT+  I+YY   +E  +   +F GDTLF  GCG+ FEG+  QM  SL   L SLP  T+++C HEYT+KNL FALTV+  N                G  TIPS +  E  TNPF+R D   LQ  V  +D ++    IR+ K+N+
Sbjct:   68 EKFPQLIVYGGAEDRGRIPGQKVFLQQGDRVEFADRIAEV-IFVPGHTRAHIAYYFPPQEASETGDLFCGDTLFSGGCGRLFEGTPTQMVDSLS-KLRSLPDNTRIWCAHEYTLKNLQFALTVDGDNADLQRRFNEVKAYRSRGEATIPSLLGVEKHTNPFLRWDQASLQSTVKSSDGVQTFARIREMKNNF 257          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_THEEB (Hydroxyacylglutathione hydrolase OS=Thermosynechococcus elongatus (strain BP-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.304e-27
Identity = 78/196 (39.80%), Postives = 104/196 (53.06%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDN--VKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGRISYYV--TGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            ++   P I VYG   D   +   T  ++ GD+   G  + +VL +  P HT+G I+YY   TG       +F GDTLF  GCG+ FEGS  QM  SL   L  LP+ T+V+C HEYT KNL FALTVEA N                G  TIPSTI  E  TNPF+R ++  +Q  VG   P++    +R ++D +
Sbjct:   66 LRSRFPDIAVYGSSEDQGRIPEQTVFLKAGDRVPFGQTYFDVLFV--PGHTRGHIAYYAPTTGD------LFCGDTLFGGGCGRLFEGSPAQMLDSLN-QLRQLPEETRVWCAHEYTQKNLSFALTVEADNPTLQERYAQVCRDRAQGKATIPSTIGLEKATNPFLRCEVRSIQIAVGATTPLQTFTRLRGKRDQY 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_GLOVI (Hydroxyacylglutathione hydrolase OS=Gloeobacter violaceus GN=gloB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.304e-27
Identity = 74/195 (37.95%), Postives = 98/195 (50.26%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            R + E  PGI VY    D   + G T ++E+GD  + G       +  P HT G I+Y+  G       +F GDTLF  GCG+ FEG+A QM  SL   L  LP  TQV+C HEYT+ NL FA T+E  N                 + T+PST+  E  TNPF+R +  +LQ   G  +P E    +R  KD +
Sbjct:   64 RELLEAYPGIAVYASRRDRGRIPGQTVELEDGDTVAFGCE-RARVIFVPGHTHGHIAYHFAGCGH----LFCGDTLFAGGCGRLFEGTARQMQHSL-GRLRELPGETQVWCAHEYTLGNLRFAHTLEPDNAELAERLRTVEVLRARKIATVPSTMAAERATNPFLRWESRQLQRAAGAIEPEEVFAHLRALKDRF 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP7 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 7424) GN=gloB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.304e-27
Identity = 70/196 (35.71%), Postives = 101/196 (51.53%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGK-EGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            R + E  P + VYGG  D   + G    ++ GD+   G     +    P HT+  I+YY   + E E   +F GDT+F  GCG+ FEG+  QM  SL   L +LP  T+++C HEYT+ NL FALTVE  N+               G  T+PS +  E  TNPF+R D   ++  +G  D ++    +R +KDN+
Sbjct:   64 RALIEHFPNLTVYGGEEDRGRIPGQEVFLKEGDRVQFGDRSGEV-FFVPGHTRAHIAYYFPPQGEEETGELFCGDTIFAGGCGRLFEGTPAQMVNSLS-KLRALPDNTRIWCAHEYTLNNLKFALTVEPENIDLQNRFSDVKIARSEGEATVPSLLGIEKLTNPFLRWDTQAIKSAMGSQDSVQVFGRLRGKKDNF 257          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2N_ARATH7.511e-2840.00Hydroxyacylglutathione hydrolase 2, mitochondrial ... [more]
GLO2_TRIEI9.809e-2839.68Hydroxyacylglutathione hydrolase OS=Trichodesmium ... [more]
GLO2_PHOPR2.185e-2736.41Hydroxyacylglutathione hydrolase OS=Photobacterium... [more]
GLO2_MARMM2.185e-2736.79Hydroxyacylglutathione hydrolase OS=Maricaulis mar... [more]
GLO2_CYAP42.854e-2738.83Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_OCHA43.728e-2741.18Hydroxyacylglutathione hydrolase OS=Ochrobactrum a... [more]
GLO2_NOSP73.728e-2737.50Hydroxyacylglutathione hydrolase OS=Nostoc punctif... [more]
GLO2_THEEB8.304e-2739.80Hydroxyacylglutathione hydrolase OS=Thermosynechoc... [more]
GLO2_GLOVI8.304e-2737.95Hydroxyacylglutathione hydrolase OS=Gloeobacter vi... [more]
GLO2_CYAP78.304e-2735.71Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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