CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SHEDO (Hydroxyacylglutathione hydrolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gloB PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.857e-24
Identity = 67/191 (35.08%), Postives = 94/191 (49.21%), Query Frame = 3
Query:   33 IKVYGGPLDNVKGCTHQVENGDKFSIG-AHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVG------FNDPIEALREIRKRKDNW 584
            + VYG   + + G TH++ +     +     NV  +  P HT G  +Y +      + A+F GDTLF  GCG+ FEGSA QM  SL   L SLP   ++YC HEYT  N+ FALTV   N                 +P++PS +  EL  NPF+R    E++  V        ND ++    +RK KDN+
Sbjct:   75 LPVYGPKAEGIAGITHEIIDERTLCLPHLEANVEIIPVPGHTLGHHAYLI------EDAIFCGDTLFSVGCGRIFEGSAAQMLASL-TKLASLPAHCKIYCAHEYTQSNINFALTVTPNNPNLLQYASWVAKARADNIPSLPSFLSTELAVNPFLRCHTYEVKTAVASQFNTEINDELQTFTLLRKWKDNF 258          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_EDWI9 (Hydroxyacylglutathione hydrolase OS=Edwardsiella ictaluri (strain 93-146) GN=gloB PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.857e-24
Identity = 75/191 (39.27%), Postives = 99/191 (51.83%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGF-NDPIEALRE---IRKRKDNW 584
            P + VYG      +GCT  V + D  S+ G  +++++L  P HT G ++YY        P +F GDTLF AGCG+ FEGSA+QM+ SL   +  LP  T V C HEYT  NL FA  V   N                  PT+PST+  E+E NPF+R    +LQ  VGF   P E  R    +R  KD++
Sbjct:   70 PEMPVYGPAETQGQGCTQVVADNDTLSLLGCQISIMAL--PGHTLGHMAYYSA------PYLFCGDTLFSAGCGRLFEGSAQQMFDSL-QRIIQLPDNTLVCCAHEYTESNLRFARHVLPKNREIETYQQHVTILRAKQQPTVPSTLRIEMEINPFLRCYDYDLQRNVGFPTQPNEIWRVFACLRNMKDSF 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PROM4 (Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain MIT 9211) GN=gloB PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.038e-24
Identity = 64/179 (35.75%), Postives = 96/179 (53.63%), Query Frame = 3
Query:   54 LDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYV--TGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNW 584
            L+ +   TH V + + F++  + +V  L  P HT+G ++YY+  T  +  +PA+F GDTLF  GCG+ FEG+  +M++SL + L SLP  T++YC HEYT  NL +A  +   ++               GL ++PSTI EE +TN F R               +E   + RK KDNW
Sbjct:   87 LERIPFQTHSVTDQEVFTLFGY-SVKVLEVPGHTRGHVAYYLSDTNADNRNPALFCGDTLFAGGCGRLFEGTPHEMFKSLKL-LNSLPSNTKIYCAHEYTESNLHWANHLYPEDLLIKKRLEYVSSQRANGLLSLPSTIAEERKTNLFFRA------------RTLEQFSQFRKHKDNW 251          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_MARAV (Hydroxyacylglutathione hydrolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=gloB PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.038e-24
Identity = 65/167 (38.92%), Postives = 90/167 (53.89%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVD 503
            + +++  P +++ G      KG T+ V  GD+    G   NVL++  P HT   I+YY   +  + P +F GDTLFV GCG+ FEG+ EQM+ SL  TL  LP  T VYC HEYT+ NL FA      +                G PT+P+TI +E + NPF+R D
Sbjct:   64 KELQQQYPDLRIVGPTDSPFKGATNTVHAGDEVVWEGITFNVLAV--PGHTLDHIAYYSDTQVNDKPVLFCGDTLFVCGCGRLFEGTPEQMHTSL-QTLRDLPDNTAVYCAHEYTLANLRFARHWLPEDKALAEFENACKDLRERGKPTVPTTIGQEKQLNPFLRWD 227          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_XANCP (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris GN=gloB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.580e-24
Identity = 63/198 (31.82%), Postives = 100/198 (50.51%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQEL------VGFNDPIEALREIRKRKDNWR 587
            +++  P +++YG   + +   T  V +GD  +    ++   L  P HT+  ++Y   G       +F+GDTLF  GCG+ FEG+  QM+ +L   L SLP  T V CGHEYT+ N  FAL V+  N                  PT+P +++ EL TNPF+R+  PE++        +     ++   E+R+ KD +R
Sbjct:   65 LQQHFPALELYGPDDERMPSATRHVAHGDTVT-ALGIDFAVLEVPGHTRSHVAYVGDGH------LFSGDTLFSLGCGRMFEGTPPQMFDAL-QRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRLHTPEIRAAAAAHASISITSDVDVFAELRRWKDAFR 254          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_XANCB (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris (strain B100) GN=gloB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.580e-24
Identity = 63/198 (31.82%), Postives = 100/198 (50.51%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQEL------VGFNDPIEALREIRKRKDNWR 587
            +++  P +++YG   + +   T  V +GD  +    ++   L  P HT+  ++Y   G       +F+GDTLF  GCG+ FEG+  QM+ +L   L SLP  T V CGHEYT+ N  FAL V+  N                  PT+P +++ EL TNPF+R+  PE++        +     ++   E+R+ KD +R
Sbjct:   65 LQQHFPALELYGPDDERMPSATRHVAHGDTVT-ALGIDFAVLEVPGHTRSHVAYVGDGH------LFSGDTLFSLGCGRMFEGTPPQMFDAL-QRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRLHTPEIRAAAAAHASISITSDVDVFAELRRWKDAFR 254          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_XANC8 (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=gloB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.580e-24
Identity = 63/198 (31.82%), Postives = 100/198 (50.51%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQEL------VGFNDPIEALREIRKRKDNWR 587
            +++  P +++YG   + +   T  V +GD  +    ++   L  P HT+  ++Y   G       +F+GDTLF  GCG+ FEG+  QM+ +L   L SLP  T V CGHEYT+ N  FAL V+  N                  PT+P +++ EL TNPF+R+  PE++        +     ++   E+R+ KD +R
Sbjct:   65 LQQHFPALELYGPDDERMPSATRHVAHGDTVT-ALGIDFAVLEVPGHTRSHVAYVGDGH------LFSGDTLFSLGCGRMFEGTPPQMFDAL-QRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRLHTPEIRAAAAAHASISITSDVDVFAELRRWKDAFR 254          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_VIBHB (Hydroxyacylglutathione hydrolase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gloB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.580e-24
Identity = 66/190 (34.74%), Postives = 97/190 (51.05%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELV----GFNDPIEALREIRKRKDNW 584
            P + V G   + +   T+ +E GDK  +   + ++ L  P HT G I Y   GK      +F GD LF AGCG+ FEG+ EQM++SL   +  LP+ T+V+C HEYT  N+ FAL VE  N                 +PTIP+T+ +E   NPF+R    E+ + V      +DP      +R+ K+ +
Sbjct:   71 PHVSVVGPKAEPIPTLTNAMEEGDKLELFGEIFMV-LGLPGHTLGHIGYVGDGK------LFCGDVLFSAGCGRIFEGTPEQMFESLSKIM-KLPEETEVFCAHEYTASNVAFALAVEPDNEHLRQYRDDVNRLRGLNIPTIPTTLRKEKLINPFLRATNAEVIQSVTNRIENSDPCSVFTALREWKNEF 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2M_ARATH (Hydroxyacylglutathione hydrolase 1, mitochondrial OS=Arabidopsis thaliana GN=GLX2-1 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 6.580e-24
Identity = 68/190 (35.79%), Postives = 98/190 (51.58%), Query Frame = 3
Query:   30 GIKVYGGPLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFND---PIEALREIRKRKDNW 584
            G KV G  +D   + G    +++ DK+    H  V  L TP HT+G IS+Y  G       +FTGD ++   CG   EG+ EQM  SL   + SLP  T +YCG E T  NL FAL+VE  N                GLP+IP+T++ E   NPF+R+   ++++ +   D     EALR I++ +D +
Sbjct:  148 GAKVIGSAVDKDRIPGIDILLKDSDKWMFAGH-EVRILDTPGHTQGHISFYFPGSA----TIFTGDLIYSLSCGTLSEGTPEQMLSSL-QKIVSLPDDTNIYCGRENTAGNLKFALSVEPKNETLQSYATRVAHLRSQGLPSIPTTVKVEKACNPFLRISSKDIRKSLSIPDSATEAEALRRIQRARDRF 331          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_SERP5 (Hydroxyacylglutathione hydrolase OS=Serratia proteamaculans (strain 568) GN=gloB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.593e-24
Identity = 67/189 (35.45%), Postives = 96/189 (50.79%), Query Frame = 3
Query:   30 GIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALR----EIRKRKDNW 584
            G+KVYG      KG  H V +G+   I       ++  P HT G +++Y        P +F GDT+F AGCG+ FEG+AEQM+ S    L  LP  T + C HEYT+ NL FA  +   +                G  ++P+T++ E + N F+R    +LQ  +GF+ P E L     E+R RKDN+
Sbjct:   71 GLKVYGPQETADKGANHIVHDGETIEINGQ-KFATIAVPGHTLGHVAFYSA------PYLFCGDTIFSAGCGRLFEGTAEQMFNSF-QQLAQLPDNTLICCAHEYTLSNLKFARAILPKDRHIETYQQQVEALRAKGQSSVPTTLQLERKINLFLRCHDTDLQRELGFHTPPEHLHSVFSELRLRKDNF 251          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2_SHEDO3.857e-2435.08Hydroxyacylglutathione hydrolase OS=Shewanella den... [more]
GLO2_EDWI93.857e-2439.27Hydroxyacylglutathione hydrolase OS=Edwardsiella i... [more]
GLO2_PROM45.038e-2435.75Hydroxyacylglutathione hydrolase OS=Prochlorococcu... [more]
GLO2_MARAV5.038e-2438.92Hydroxyacylglutathione hydrolase OS=Marinobacter a... [more]
GLO2_XANCP6.580e-2431.82Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_XANCB6.580e-2431.82Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_XANC86.580e-2431.82Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_VIBHB6.580e-2434.74Hydroxyacylglutathione hydrolase OS=Vibrio harveyi... [more]
GLO2M_ARATH6.580e-2435.79Hydroxyacylglutathione hydrolase 1, mitochondrial ... [more]
GLO2_SERP58.593e-2435.45Hydroxyacylglutathione hydrolase OS=Serratia prote... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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