CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:208..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_RHOBL (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas blastica GN=gloB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.593e-24
Identity = 68/187 (36.36%), Postives = 97/187 (51.87%), Query Frame = 3
Query:   30 GIKVYGGPLD--NVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEAL--REIRKRKD 578
            G +V+G   D   +    H +  GD+ +IGA   V+ +  P HT+G I+++  G        FTGD+L  AGCG+ FEG+  +M+ SL   L +LP  T +  GH+Y   NL FAL +E GN                G   +P T+ EEL TNPF+R  LP+++  VG     + +   EIR RKD
Sbjct:   73 GARVHGAAADAHRLPPLDHALREGDRVAIGAESAVV-IDVPGHTRGHIAFHFPGSA----LAFTGDSLMAAGCGRLFEGTPAEMWASLS-KLAALPPETLICSGHDYLDGNLRFALALEPGNPALISRQGRLSEMRREGRLPMPWTLAEELATNPFLRAPLPQMKAAVGLPQASDTVVFAEIRARKD 253          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_BARHE (Hydroxyacylglutathione hydrolase OS=Bartonella henselae GN=gloB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.593e-24
Identity = 66/165 (40.00%), Postives = 87/165 (52.73%), Query Frame = 3
Query:   96 DKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPI--EALREIRKRKDNW 584
            + F  G H  +L+L TP HT G +SYY      ++  +F GDTLF  GCG+ FEG+  QM  SL   L  LP  T +YCGHEYT  N LFALT++  N                   T+P T+ +E + NPF+R D   L++ +        E   EIRKRKDN+
Sbjct:   95 ESFLFGTHT-ILALSTPGHTLGALSYYFP----QENLLFAGDTLFSLGCGRLFEGTPAQMLNSL-KKLRQLPDETLLYCGHEYTKSNALFALTLDPYNQKLQQRAEDVFLLRAKNAMTLPVTLGQEKKNNPFLRWDNRTLRKTLRMEKETDEEVFAEIRKRKDNF 253          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_RHIEC (Hydroxyacylglutathione hydrolase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=gloB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.122e-23
Identity = 70/184 (38.04%), Postives = 92/184 (50.00%), Query Frame = 3
Query:   48 GPLDN---VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQE--LVGFNDPIEALREIRKRKDNW 584
            GP++    + G    + +GD F  G H  V  + TP HT G I Y+      +D  +F  DTLF  GCG+ FE  A  M+ SL   L  LP  T VY GHEYT+ N  FALTV+  N                G  T+P+T+  E ETNPF+R   P ++   ++      E   EIRKRKDN+
Sbjct:   79 GPINEAIAIPGLDRTMADGDSFLFGDHT-VKVIETPGHTAGHICYHFV----DDKLLFAADTLFALGCGRLFERPAADMWHSL-QKLAVLPDETAVYFGHEYTLSNARFALTVDPDNERLKSRAAEIEALRAEGKFTVPTTLGLEKETNPFLRAADPAIRRHLIMEGKTNEEVFAEIRKRKDNF 256          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PSEAE (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa GN=gloB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.122e-23
Identity = 66/163 (40.49%), Postives = 87/163 (53.37%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRV 500
            +KE+  G +V G   + +      +E+G++  +   V  +  H P HT G I+YY      E P +F GDTLF AGCG+ FEG+  QM+ SL   L +LP  T+VYC HEYT+ NL FAL VE  N                   T+PS I  EL TNPF+RV
Sbjct:   68 LKELT-GARVLGPANEKIPARDLALEDGERVEVLGLVFEI-FHVPGHTLGHIAYY---HPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSL-ARLAALPANTRVYCTHEYTLSNLRFALAVEPDNAALRERFEEATRLRERDRITLPSEISLELSTNPFLRV 224          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_PSEA8 (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa (strain LESB58) GN=gloB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.122e-23
Identity = 66/163 (40.49%), Postives = 87/163 (53.37%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRV 500
            +KE+  G +V G   + +      +E+G++  +   V  +  H P HT G I+YY      E P +F GDTLF AGCG+ FEG+  QM+ SL   L +LP  T+VYC HEYT+ NL FAL VE  N                   T+PS I  EL TNPF+RV
Sbjct:   68 LKELT-GARVLGPANEKIPARDLALEDGERVEVLGLVFEI-FHVPGHTLGHIAYY---HPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSL-ARLAALPANTRVYCTHEYTLSNLRFALAVEPDNAALRERFEEATRLRERDRITLPSEISLELSTNPFLRV 224          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_LEGPA (Hydroxyacylglutathione hydrolase OS=Legionella pneumophila (strain Paris) GN=gloB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.122e-23
Identity = 65/193 (33.68%), Postives = 105/193 (54.40%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGA-HVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQEL-----VGFNDPIEALREIRKRKDNWR 587
            P  KVYG   + +   TH ++ G    +G+ H ++L    P HT   ISYY    E +   +F GDTLF AGCG+ F+G+ E++++SL +    LP+ T+V+C HEYT++NL FA TVE  N                   T+PS I+ EL  NPF+R D  ++++         +D ++  + +R +K++++
Sbjct:   71 PSCKVYGPIDERINNVTHPIKQGQSVQVGSLHFHIL--FNPGHTSTHISYY----EPQQGWLFCGDTLFSAGCGRVFDGTIEELHESL-LLFKKLPRNTKVFCAHEYTLQNLKFAHTVEPCN--SSVINYMQQILKQPSPCTLPSNIDLELSINPFLRTDKEQVKQYALSHGANSSDSLDVFKVLRNQKNSFK 254          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_ALISL (Hydroxyacylglutathione hydrolase OS=Aliivibrio salmonicida (strain LFI1238) GN=gloB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.122e-23
Identity = 69/190 (36.32%), Postives = 94/190 (49.47%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGF----NDPIEALREIRKRKDNW 584
            P I V G   + +   TH V +GD   +  +   + L    HTKG I+Y        D  +F GDTLF AGCG+ FEG+AEQM+ SL   L +LP  T+VYC HEYT  NL FAL VE  N                G  TIP+T++ E   NPF+R     +++ V      +  +     +R+ KD +
Sbjct:   71 PNINVVGPENEPIPTLTHPVGDGDFVEL-FNEKFMVLGVEGHTKGHIAYI------GDEKLFCGDTLFSAGCGRLFEGTAEQMFHSL-QKLAALPDETEVYCAHEYTASNLAFALAVEPDNDYLQQYREKVLRLRANGKATIPTTMQREKLINPFLRTSEASVKQAVSSKVENDSEVATFAALRRWKDEF 252          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_LEGPH (Hydroxyacylglutathione hydrolase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gloB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.466e-23
Identity = 65/193 (33.68%), Postives = 104/193 (53.89%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGA-HVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQEL-----VGFNDPIEALREIRKRKDNWR 587
            P  KVYG   + +   TH ++ G    +G+ H ++L    P HT   ISYY    E +   +F GDTLF AGCG+ F+G+ E++++SL +    LP+ T+V+C HEYT +NL FA TVE  N                   T+PS I+ EL  NPF+R D  ++++         +D ++  + +R +K++++
Sbjct:   71 PSCKVYGPIDERINNVTHPIKQGQSVQVGSLHFHIL--FNPGHTSTHISYY----EPQQGWLFCGDTLFSAGCGRVFDGTIEELHESL-LLFKKLPRNTKVFCAHEYTFQNLKFAHTVEPCN--SSVINYMQQILKQPSSCTLPSNIDLELSINPFLRTDKEQVKQYALSHGANSSDSLDVFKVLRNQKNSFK 254          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_LEGPC (Hydroxyacylglutathione hydrolase OS=Legionella pneumophila (strain Corby) GN=gloB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.466e-23
Identity = 65/193 (33.68%), Postives = 105/193 (54.40%), Query Frame = 3
Query:   27 PGIKVYGGPLDNVKGCTHQVENGDKFSIGA-HVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQEL-----VGFNDPIEALREIRKRKDNWR 587
            P  KVYG   + +   TH ++ G    +G+ H ++L    P HT   ISYY    E +   +F GDTLF AGCG+ F+G+ E++++SL +    LP+ T+V+C HEYT++NL FA TVE  N                   T+PS I+ EL  NPF+R D  ++++         +D ++  + +R +K++++
Sbjct:   71 PSCKVYGPIDERINNVTHPIKQGQSVQVGSLHFHIL--FNPGHTSTHISYY----EPQKGWLFCGDTLFSAGCGRVFDGTIEELHESL-LLFKKLPRNTKVFCAHEYTLQNLKFAHTVEPCN--SSVINYMQQILKQPSPCTLPSNIDLELSINPFLRTDKEQVKQYALSHGANSSDSLDVFKVLRNQKNSFK 254          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_KLEP7 (Hydroxyacylglutathione hydrolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=gloB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.466e-23
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3
Query:    6 RTMKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVD----LPELQELVGFNDPIEALREIRKRKDNW 584
            + ++E  P I VYG      KG T  V +GD+ SI  H +     TP HT G I YY       +P +F GDT+F  GCG+ FEG+AEQMYQS  + + +LP+ T + C HEYT+ N+ FAL++   +                   T+P T++ E   N F+RV+    + ++ +       +     +R +KD++
Sbjct:   63 KQLREKFPSIVVYGPAETQDKGVTQVVGDGDRLSILGH-DFSIFSTPGHTLGHICYY------SEPYLFCGDTMFSGGCGRLFEGTAEQMYQSF-MKINALPEETLICCAHEYTLANMKFALSILPDDRDINDYYHKVNELRAKKQKTLPVTLKNERRINLFLRVNDIDLIDKINKETNLQHSVARFAWLRSKKDDF 251          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2_RHOBL8.593e-2436.36Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_BARHE8.593e-2440.00Hydroxyacylglutathione hydrolase OS=Bartonella hen... [more]
GLO2_RHIEC1.122e-2338.04Hydroxyacylglutathione hydrolase OS=Rhizobium etli... [more]
GLO2_PSEAE1.122e-2340.49Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_PSEA81.122e-2340.49Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_LEGPA1.122e-2333.68Hydroxyacylglutathione hydrolase OS=Legionella pne... [more]
GLO2_ALISL1.122e-2336.32Hydroxyacylglutathione hydrolase OS=Aliivibrio sal... [more]
GLO2_LEGPH1.466e-2333.68Hydroxyacylglutathione hydrolase OS=Legionella pne... [more]
GLO2_LEGPC1.466e-2333.68Hydroxyacylglutathione hydrolase OS=Legionella pne... [more]
GLO2_KLEP71.466e-2332.99Hydroxyacylglutathione hydrolase OS=Klebsiella pne... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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