CF834780

Overview
NameCF834780
Unique NameCF834780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF834780 vs. ExPASy Swiss-Prot
Match: FLRT_CITMA (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima GN=C12RT1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15
Identity = 45/134 (33.58%), Postives = 74/134 (55.22%), Query Frame = 1 
Query:   49 DPSCIEWLGKQPVRSVLYVSFGSITLQKREQLFEFWHGLVDSKQRFLWVIR--PDSVIGEGDAP----AELVEGTKERGHLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQINSRFV 432
            D   ++WL ++  RSV+Y SFGS      +++ +   GL+ ++  F+W  R  PD  +   +A     AE +E   +   +  WVPQ ++L H ++ GFL+H GW S +E +V GVP+I  P   +Q  N++ V
Sbjct:  246 DTKIMDWLSQKEPRSVVYASFGSEYFPSTDEIHDIAIGLLLTEVNFIWAFRLHPDEKMTIEEALPQGFAEEIERNNKGMIVQGWVPQAKILRHGSIGGFLSHCGWGSVVEGMVFGVPIIGVPMAYEQPSNAKVV 379
The following BLAST results are available for this feature:
BLAST of CF834780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
FLRT_CITMA2.474e-1533.58Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltran... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834780 ID=CF834780; Name=CF834780; organism=Citrus sinensis; type=EST; length=690bp
CGTGATCTCACGATTATACAAAAGTCTCTAAACAGTCTCTGGGAAGTGGA
CCCTAGTTGCATTGAATGGCTTGGTAAACAGCCTGTGCGGTCTGTACTGT
ACGTAAGCTTTGGTAGCATTACACTCCAGAAAAGGGAACAGCTGTTTGAG
TTTTGGCACGGTCTTGTAGACAGTAAGCAGCGGTTCTTGTGGGTCATTAG
GCCAGATTCTGTGATTGGCGAAGGTGACGCCCCGGCAGAGCTTGTGGAGG
GCACGAAGGAGAGAGGTCATTTGGTTAGTTGGGTTCCACAGGAGGAGGTA
CTGGCTCACCAGGCTGTGGCTGGATTCTTGACACACAGCGGCTGGAACTC
AACATTGGAGAGTATAGTAGCCGGGGTGCCAATGATTTGCTGGCCTTACT
TTGCTGATCAACAGATCAATAGTAGGTTTGTGAGTGAAGTGTGGAATCTT
GGATTGGATATGAAGGATGTGTGCGATAGAAATGTTGTTGAGAAAATGGT
GAATGATCTCATGGTGGAGAGGAAGGAGGAGTTTATGAGAGCAGCTGATC
GGATGGCTACAATGGCTAGAACCACTGCTAATGAAGGTGGACCATCTTAT
TGTAATTTGGACCGTCTGATTGATGATATTAAGATGATGAGCTCCCAAGC
ATGAAAACATATAGCTAAGGTTAGTGGCAGATGTTACTGC
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