CF834781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B3_WHEAT (Histone H2B.3 OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 162.925 bits (411), Expect = 1.030e-39 Identity = 81/91 (89.01%), Postives = 88/91 (96.70%), Query Frame = -3 Query: 237 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509 +ETYKIYIFKVLKQVHPDIGISSKAM IMNS +NDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 48 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 138
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B4_CHLRE (Histone H2B.4 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 8.722e-39 Identity = 78/90 (86.67%), Postives = 86/90 (95.56%), Query Frame = -3 Query: 240 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 509 +ETYK+YI+KVLKQVHPD GISSKAM IMNS +NDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 63 VETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B3_CHLRE (Histone H2B.3 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 8.722e-39 Identity = 78/90 (86.67%), Postives = 86/90 (95.56%), Query Frame = -3 Query: 240 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 509 +ETYK+YI+KVLKQVHPD GISSKAM IMNS +NDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 63 VETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B2_CHLRE (Histone H2B.2 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 8.722e-39 Identity = 78/90 (86.67%), Postives = 86/90 (95.56%), Query Frame = -3 Query: 240 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 509 +ETYK+YI+KVLKQVHPD GISSKAM IMNS +NDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 66 VETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 155
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B1_CHLRE (Histone H2B.1 OS=Chlamydomonas reinhardtii GN=H2B PE=1 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 8.722e-39 Identity = 78/90 (86.67%), Postives = 86/90 (95.56%), Query Frame = -3 Query: 240 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 509 +ETYK+YI+KVLKQVHPD GISSKAM IMNS +NDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 63 VETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B4_VOLCA (Histone H2B.4 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 159.073 bits (401), Expect = 1.488e-38 Identity = 78/90 (86.67%), Postives = 86/90 (95.56%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 ETYK+YI+KVLKQVHPD GISSKAM IMNS +NDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 66 ETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 155
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B3_VOLCA (Histone H2B.3 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 159.073 bits (401), Expect = 1.488e-38 Identity = 78/90 (86.67%), Postives = 86/90 (95.56%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 ETYK+YI+KVLKQVHPD GISSKAM IMNS +NDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 68 ETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 157
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B_PEA (Histone H2B (Fragments) OS=Pisum sativum GN=HIS2B PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.392e-36 Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = -3 Query: 240 TYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 503 T KIYIFKVLKQVHPDIGISSKAMGIMNS +NDIFEKLA EASRLARYNKK TIT REIQTAVRL+LPGE+AKH VSE TKAVTKFTS Sbjct: 31 TVKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASEASRLARYNKKSTITPREIQTAVRLLLPGEVAKHKVSEATKAVTKFTS 118
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B3B_MOUSE (Histone H2B type 3-B OS=Mus musculus GN=Hist3h2bb PE=1 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 1.392e-36 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y IY++KVLKQVHPD GISSKAMGIMNS +NDIFE++A EASRLA YNK+ TITSRE+QTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 ESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B3B_HUMAN (Histone H2B type 3-B OS=Homo sapiens GN=HIST3H2BB PE=1 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 1.392e-36 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y IY++KVLKQVHPD GISSKAMGIMNS +NDIFE++A EASRLA YNK+ TITSRE+QTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 ESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125 The following BLAST results are available for this feature:
BLAST of CF834781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834781 ID=CF834781; Name=CF834781; organism=Citrus sinensis; type=EST; length=586bpback to top |