CF834781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B1M_HUMAN (Histone H2B type 1-M OS=Homo sapiens GN=HIST1H2BM PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 2.375e-36 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y +Y++KVLKQVHPD GISSKAMGIMNS +NDIFE++A EASRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 ESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B1H_MOUSE (Histone H2B type 1-H OS=Mus musculus GN=Hist1h2bh PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 2.375e-36 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y +Y++KVLKQVHPD GISSKAMGIMNS +NDIFE++A EASRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 ESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B1H_HUMAN (Histone H2B type 1-H OS=Homo sapiens GN=HIST1H2BH PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 2.375e-36 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y +Y++KVLKQVHPD GISSKAMGIMNS +NDIFE++A EASRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 ESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B1D_HUMAN (Histone H2B type 1-D OS=Homo sapiens GN=HIST1H2BD PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.375e-36 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y +Y++KVLKQVHPD GISSKAMGIMNS +NDIFE++A EASRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 ESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B1C_MOUSE (Histone H2B type 1-C/E/G OS=Mus musculus GN=Hist1h2bc PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 2.375e-36 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y +Y++KVLKQVHPD GISSKAMGIMNS +NDIFE++A EASRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 ESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B1K_MOUSE (Histone H2B type 1-K OS=Mus musculus GN=Hist1h2bk PE=1 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 3.102e-36 Identity = 73/90 (81.11%), Postives = 84/90 (93.33%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y +Y++KVLKQVHPD GISSKAMGIMNS +NDIFE++A EASRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TS+ Sbjct: 36 ESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 125
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B_CHITH (Histone H2B OS=Chironomus thummi thummi PE=3 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 4.051e-36 Identity = 75/90 (83.33%), Postives = 83/90 (92.22%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y IYIFKVLKQVHPD G+SSKAM IMNS +NDIFE++A EASRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 35 ESYAIYIFKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 124
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B1J_HUMAN (Histone H2B type 1-J OS=Homo sapiens GN=HIST1H2BJ PE=1 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 4.051e-36 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y IY++KVLKQVHPD GISSKAMGIMNS +NDIFE++A EASRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TS+ Sbjct: 36 ESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 125
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B_SALTR (Histone H2B OS=Salmo trutta PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 5.291e-36 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y IY++KVLKQVHPD GISSKAMGIMNS +NDIFE++A E+SRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 34 ESYAIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 123
BLAST of CF834781 vs. ExPASy Swiss-Prot
Match: H2B_PLADU (Histone H2B OS=Platynereis dumerilii PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 5.291e-36 Identity = 75/90 (83.33%), Postives = 83/90 (92.22%), Query Frame = -3 Query: 237 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSLLNDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 506 E+Y IYI+KVLKQVHPD GISSKAM IMNS +NDIFE++A EASRLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 33 ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122 The following BLAST results are available for this feature:
BLAST of CF834781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834781 ID=CF834781; Name=CF834781; organism=Citrus sinensis; type=EST; length=586bpback to top |