CF834782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_MAGGR (Histone H2B OS=Magnaporthe grisea GN=HTB1 PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 2.689e-35 Identity = 76/107 (71.03%), Postives = 89/107 (83.18%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K AASGD ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 30 KTAASGDKKKRTKTRK-ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 135
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2BE2_PSAMI (Histone H2B.2, embryonic OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.689e-35 Identity = 73/90 (81.11%), Postives = 85/90 (94.44%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 E+Y IYI+KVLKQVHPD GISS+AM IMNSF+NDIFE++A E+SRLA+YNKK TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 33 ESYGIYIYKVLKQVHPDTGISSRAMIIMNSFVNDIFERIAGESSRLAQYNKKSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTTS 122
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B1A_HUMAN (Histone H2B type 1-A OS=Homo sapiens GN=HIST1H2BA PE=1 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 2.689e-35 Identity = 73/90 (81.11%), Postives = 83/90 (92.22%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 E+Y IYI+KVLKQVHPD GISSKAM IMNSF+ DIFE++A EASRLA Y+K+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 37 ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 126
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_PODAN (Histone H2B OS=Podospora anserina GN=HTB1 PE=3 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 7.825e-35 Identity = 75/107 (70.09%), Postives = 89/107 (83.18%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K AASG+ ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 30 KTAASGEKKKRTKARK-ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 135
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_COCIM (Histone H2B OS=Coccidioides immitis GN=HTB1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.825e-35 Identity = 75/107 (70.09%), Postives = 89/107 (83.18%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K AASG+ ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 32 KTAASGEKKKRTKARK-ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 137
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_ASPTN (Histone H2B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=htb1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.825e-35 Identity = 75/105 (71.43%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 207 AASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 AASGD ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 35 AASGDKKKRGKTRK-ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 138
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_ASPOR (Histone H2B OS=Aspergillus oryzae GN=htb1 PE=3 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 7.825e-35 Identity = 75/105 (71.43%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 207 AASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 AASGD ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 36 AASGDKKKRGKTRK-ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 139
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_ASPNC (Histone H2B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=htb1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.825e-35 Identity = 75/105 (71.43%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 207 AASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 AASGD ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 36 AASGDKKKRGKTRK-ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 139
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_ASPCL (Histone H2B OS=Aspergillus clavatus GN=htb1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.825e-35 Identity = 75/105 (71.43%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 207 AASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 AASGD ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 35 AASGDKKKRGKTRK-ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 138
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B1_RAT (Histone H2B type 1 OS=Rattus norvegicus PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 7.825e-35 Identity = 73/90 (81.11%), Postives = 83/90 (92.22%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 E+Y +Y++KVLKQVHPD GISSKAMGIMNSF+NDIFE++A E RLA YNK+ TITSREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 ESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGER-RLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 124 The following BLAST results are available for this feature:
BLAST of CF834782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834782 ID=CF834782; Name=CF834782; organism=Citrus sinensis; type=EST; length=590bpback to top |