CF834782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_CHAGB (Histone H2B OS=Chaetomium globosum GN=HTB1 PE=3 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.022e-34 Identity = 75/107 (70.09%), Postives = 88/107 (82.24%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K A SGD ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 30 KTAPSGDKKKRTKARK-ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 135
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2BE1_PSAMI (Histone H2B.1, embryonic OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.022e-34 Identity = 71/90 (78.89%), Postives = 84/90 (93.33%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 E+Y IYI+KVLKQVHPD G+SS+AM IMNSF+NDIFE++A EASRL +YNKK TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T++ Sbjct: 33 ESYGIYIYKVLKQVHPDTGVSSRAMTIMNSFVNDIFERIAGEASRLTQYNKKSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTA 122
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B2_CANAL (Histone H2B.2 OS=Candida albicans GN=HTB2 PE=3 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.022e-34 Identity = 73/107 (68.22%), Postives = 86/107 (80.37%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K+ AS D ETY YI+KVLKQ HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 22 KKTASTDGAKKRTKARKETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERIASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 128
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_EUPCR (Histone H2B OS=Euplotes crassus GN=H2B1 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 69/90 (76.67%), Postives = 83/90 (92.22%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 ET+ +YI++VLKQVHP+ G+S K+M IMNSFINDIFEK+A EAS+L RYNKK T++SRE+QTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 24 ETFSVYIYRVLKQVHPETGVSKKSMSIMNSFINDIFEKIALEASKLVRYNKKHTLSSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 113
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_AJECA (Histone H2B OS=Ajellomyces capsulata GN=HTB1 PE=3 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/107 (68.22%), Postives = 87/107 (81.31%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K A+G ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 30 KTTAAGGEKKKRSKTRKETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 136
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B1_CANAL (Histone H2B.1 OS=Candida albicans GN=HTB1 PE=3 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/107 (68.22%), Postives = 86/107 (80.37%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K+ AS D ETY YI+KVLKQ HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 22 KKTASTDGAKKRTKARKETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 128
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_NEOFI (Histone H2B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=htb1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.743e-34 Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 207 AASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 AA+GD ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 35 AATGDKKKRGKTRK-ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 138
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_LODEL (Histone H2B OS=Lodderomyces elongisporus GN=HTB1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.743e-34 Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K A+S D ETY YI+KVLKQ HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++RE+QTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 23 KTASSTDGGKKRTKARKETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERIASEASKLAAYNKKSTISAREVQTAVRLILPGELAKHAVSEGTRAVTKYSSA 129
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_ASPFU (Histone H2B OS=Aspergillus fumigatus GN=htb1 PE=3 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 1.743e-34 Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 207 AASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 AA+GD ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 35 AATGDKKKRGKTRK-ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 138
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_ROSNE (Histone H2B OS=Rosellinia necatrix GN=hh2b PE=3 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 2.277e-34 Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 45 ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 134 The following BLAST results are available for this feature:
BLAST of CF834782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834782 ID=CF834782; Name=CF834782; organism=Citrus sinensis; type=EST; length=590bpback to top |