CF834782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_EMENI (Histone H2B OS=Emericella nidulans GN=htbA PE=3 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.277e-34 Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS Sbjct: 49 ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 138
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: HSB1_PICST (Histone H2B.1 OS=Pichia stipitis GN=HTB1 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.883e-34 Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K+ AS ETY YI+KVLKQ HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 23 KKTASATDSKKRTKTRKETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERIASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 129
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2BS1_STRPU (Histone H2B.1, sperm OS=Strongylocentrotus purpuratus PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.883e-34 Identity = 68/90 (75.56%), Postives = 83/90 (92.22%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 E+Y IYI+KVLKQVHPD GISS+ M IMNSF+ND+FE++A EASRL +YN++ T++SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 50 ESYGIYIYKVLKQVHPDTGISSRGMSIMNSFVNDVFERVAAEASRLTKYNRRSTVSSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 139
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B2_PICST (Histone H2B.2 OS=Pichia stipitis GN=HTB2 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.883e-34 Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K+ AS ETY YI+KVLKQ HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 23 KKTASSTDAKKRTKTRKETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERIASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 129
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B2_ASHGO (Histone H2B.2 OS=Ashbya gossypii GN=HTB2 PE=3 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 3.883e-34 Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K AS D ETY YI+KVLKQ HPD GIS K+M I+NSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++SS Sbjct: 18 KTTASTDASKKRTKTRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 124
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B1_DEBHA (Histone H2B.1 OS=Debaryomyces hansenii GN=HTB1 PE=3 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 6.624e-34 Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K+ AS ETY YI+KVLKQ HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 22 KKTASATGTKKRSKTRKETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERIAGEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 128
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B_USTMA (Histone H2B OS=Ustilago maydis GN=HTB1 PE=3 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 8.651e-34 Identity = 68/90 (75.56%), Postives = 82/90 (91.11%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 ETY YI++VLKQVHPD GIS+KAM I+NSF+ DIFE++A EAS+LA YNKK TI+SREIQTAVRL+LPGEL+KHA+SEGTK+VTKF+SS Sbjct: 52 ETYSTYIYRVLKQVHPDTGISNKAMAILNSFVQDIFERIATEASKLASYNKKSTISSREIQTAVRLILPGELSKHAISEGTKSVTKFSSS 141
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B2_DEBHA (Histone H2B.2 OS=Debaryomyces hansenii GN=HTB2 PE=3 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 8.651e-34 Identity = 69/90 (76.67%), Postives = 81/90 (90.00%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 ETY YI+KVLKQ HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+ Sbjct: 38 ETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERIAGEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 127
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B1_SCHPO (Histone H2B-alpha OS=Schizosaccharomyces pombe GN=htb1 PE=1 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 8.651e-34 Identity = 69/90 (76.67%), Postives = 83/90 (92.22%), Query Frame = 3 Query: 252 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 ETY YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQTAVRL+LPGELAKHAV+EGTK+VTK++SS Sbjct: 35 ETYSSYIYKVLKQVHPDTGISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSREIQTAVRLILPGELAKHAVTEGTKSVTKYSSS 124
BLAST of CF834782 vs. ExPASy Swiss-Prot
Match: H2B1_ASHGO (Histone H2B.1 OS=Ashbya gossypii GN=HTB1 PE=3 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 8.651e-34 Identity = 71/107 (66.36%), Postives = 86/107 (80.37%), Query Frame = 3 Query: 201 KEAASGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 521 K ++S D ETY YI+KVLKQ HPD GIS K+M I+NSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++SS Sbjct: 23 KTSSSVDASKKRTKTRKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 129 The following BLAST results are available for this feature:
BLAST of CF834782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834782 ID=CF834782; Name=CF834782; organism=Citrus sinensis; type=EST; length=590bpback to top |