CF834784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: TTDT_ECO57 (L-tartrate/succinate antiporter OS=Escherichia coli O157:H7 GN=ttdT PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 63/194 (32.47%), Postives = 105/194 (54.12%), Query Frame = 2 Query: 14 LRLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVW 574 L LW+FGG D + AA++G S+ +L+ +++W + + AW+ W A+LI +A LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A + +A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I ++ +++ + G +W Sbjct: 297 LVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLS--GYSPTMVMVALIVVFYLLRYFFASATAYTSAL--APMMIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLW 481
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: TTDT_SHIFL (L-tartrate/succinate antiporter OS=Shigella flexneri GN=ttdT PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 63/194 (32.47%), Postives = 105/194 (54.12%), Query Frame = 2 Query: 14 LRLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVW 574 L LW+FGG D + AA++G S+ +L+ +++W + + AW+ W A+LI +A LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A + +A+AL P P F MV A L LT Y G +P++YG+ Y+P A +W G I ++ +++ + G +W Sbjct: 297 LVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLS--GYSPTMVMVTLIVVFYLLRYFFASATAYTCAL--APMMIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLW 481
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: TTDT_ECOL5 (L-tartrate/succinate antiporter OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ttdT PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.349e-22 Identity = 62/194 (31.96%), Postives = 104/194 (53.61%), Query Frame = 2 Query: 14 LRLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVW 574 L LW+FGG D + AA++G S+ +L+ +++W + + AW+ W A+LI +A LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A + +A+AL P P F MV A L LT Y G +P++YG+ Y+P +W G I ++ +++ + G +W Sbjct: 297 LVLWIFGG----DYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLS--GYSPTIVMVALIVVFYLLRYFFASATAYTSAL--APMMIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTVDYWRLGAIFGLIFLVLLVITGLLW 481
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: TTDT_ECOUT (L-tartrate/succinate antiporter OS=Escherichia coli (strain UTI89 / UPEC) GN=ttdT PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.418e-22 Identity = 62/194 (31.96%), Postives = 103/194 (53.09%), Query Frame = 2 Query: 14 LRLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVW 574 L LW+FGG D + AA++G S+ +L+ ++ W + + AW+ W A+LI +A LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A + +A+AL P P F MV A L LT Y G +P++YG+ Y+P +W G I ++ +++ + G +W Sbjct: 297 LVLWIFGG----DYIDAAMVGYSVVALMLLLRIICWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLS--GYSPTIVMVALIVVFYLLRYFFASATAYTSAL--APMMIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTVDYWRLGAIFGLIFLVLLVITGLLW 481
BLAST of CF834784 vs. ExPASy Swiss-Prot
Match: TTDT_ECOL6 (L-tartrate/succinate antiporter OS=Escherichia coli O6 GN=ttdT PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.418e-22 Identity = 62/194 (31.96%), Postives = 103/194 (53.09%), Query Frame = 2 Query: 14 LRLWVFGGRLNVDPVTAAILGLSI---LLVTGVVTWKECLPESVAWDTLTWFAALIAMAGYLNKYGLITWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVASALGCP----PYFVAMVLAFFSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFIVSIVNIIIWLGVGGVW 574 L LW+FGG D + AA++G S+ +L+ ++ W + + AW+ W A+LI +A LN G I+WF + + + G S + LI++++ YFFAS A+ A+ A + +A+AL P P F MV A L LT Y G +P++YG+ Y+P +W G I ++ +++ + G +W Sbjct: 297 LVLWIFGG----DYIDAAMVGYSVVALMLLLRIICWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLS--GYSPTIVMVALIVVFYLLRYFFASATAYTSAL--APMMIAAALAMPEIPLPVFCLMVGAAI-GLGSILTPYATGPSPIYYGSGYLPTVDYWRLGAIFGLIFLVLLVITGLLW 481 The following BLAST results are available for this feature:
BLAST of CF834784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834784 ID=CF834784; Name=CF834784; organism=Citrus sinensis; type=EST; length=585bpback to top |