CF834785

Overview
NameCF834785
Unique NameCF834785
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = -2
Query:  210 HSKTMKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFK--GNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNG 695
            H    KK++ E+ R+ G    I E    K+ YL+AVIKET                 D ++ GY+IPA+S++++NAW +  +PA W++P+ F PERFL+  S  +  GNDF +IPFG GRR CPG   A+ I+ + +  ++  F+   P  Q +  +D  E  G
Sbjct:  325 HPDIQKKLRAEIDRVLGPDHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSK--IDTSEKGG 486          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 69/175 (39.43%), Postives = 102/175 (58.29%), Query Frame = -2
Query:  177 HSKTMKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWE-EPEKFNPERFLDNCSSFKGNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDL-DVDESNGITIPRKFPLVV 695
            H + MKK+Q+E+   +     + E  +EKM YL  VIKE               + +DVQ+ GY+I A + VIINAWA+ R+PA W  +  ++ PER       F+  D  F+PFGAGRR CPG  F++ + +L L+NL+ +F+W L      +D  D+ E++GI + RKFPL+V
Sbjct:  318 HPECMKKLQDEINSFSTHNLNVTEKEVEKMNYLHCVIKEGLRLHPSGPLLFRLPS-EDVQLKGYDISAGTHVIINAWALQRNPAIWGLDANEYRPERHFWYEFGFQRTDSKFVPFGAGRRLCPGIGFSLVLSKLALANLVKRFNWRLKVGPVGDDKPDLAEASGIDVCRKFPLIV 491          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27
Identity = 59/164 (35.98%), Postives = 93/164 (56.71%), Query Frame = -2
Query:  210 HSKTMKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFK--GNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNG 695
            H +  KK+++E+  + G    I E    K+ YL+AVIKET                 D ++GGY+IPA+S++++NAW +  +P  W++PE+F PERFL+  S  +  GNDF ++PFG GRR CPG   A+ I+ + +  L+  F+   P  + +  +D  E  G
Sbjct:  325 HPEIQKKLRDELETVLGPGVQITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGKSK--IDTSEKGG 486          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26
Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = -2
Query:  210 HSKTMKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFK--GNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNG 695
            H +  KK++ E+  + G    I E    K+ YL AV+KET                 D ++GG++IPA+S++++NAW +  +PA W+ PE+F PERFL+  +  +  GNDF ++PFG GRR CPG   A+ I+ + L  L+  F+   P  Q +  +D  E  G
Sbjct:  325 HPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSK--IDTSEKGG 486          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26
Identity = 60/159 (37.74%), Postives = 93/159 (58.49%), Query Frame = -2
Query:  210 KKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFK--GNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNG 680
            KK++ E+  + G+   I E  ++K+ YL+AVIKET                 D ++ GY+IPA+S++++NAW +  +PA W +P++F PERFL+  S  +  GNDF +IPFG GRR CPG   A+ I+ +V+  L+  F+   P  Q +  +D  E  G
Sbjct:  331 KKLRHELDTVLGAGVQICEPDVQKLPYLQAVIKETLRYRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSK--IDTAEKGG 487          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26
Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = -2
Query:  210 HSKTMKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFK--GNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNG 695
            H +  KK++ E+  + G    I E    K+ YL AV+KET                 D ++GG++IPA+S++++NAW +  +PA W+ PE+F PERFL+  +  +  GNDF ++PFG GRR CPG   A+ I+ + L  L+  F+   P  Q +  +D  E  G
Sbjct:  325 HPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSK--IDTSEKGG 486          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 59/164 (35.98%), Postives = 92/164 (56.10%), Query Frame = -2
Query:  210 HSKTMKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFK--GNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNG 695
            H     KV+EE+ R+ G    + E  + K+ YL+AVIKET                 D ++ G++IPA+S++++NAW +  +PA W++PE+F PERFL+  S  +  GNDF ++PFG GRR CPG   A+ I+ + +  L+   +   P  Q +  +D  E  G
Sbjct:  326 HQDIQNKVREEMDRVLGPGHQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPGQSK--IDTSEKGG 487          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.359e-26
Identity = 66/178 (37.08%), Postives = 99/178 (55.62%), Query Frame = -2
Query:  165 MKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKD-VQVGGYNIPAKSRVIINAWAIGRDPASW-EEPEKFNPERFLDNCSSF---KGNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNGITIPRKFPLVVVATP 683
            + + Q+E+ R+ G    + E  I  + YL+A+ KET            R   +  V V GY IP  +R+ +N WAIGRDP+ W + P +F+PERFL   ++    +GN F  IPFGAGRR C G    I +VE +L  L++ FDW L     E++L++DE+ G+ + +  PL  +  P
Sbjct:  332 LTRAQDEMDRVIGRDRRLLESDIPNLPYLQAICKETFRKHPSTPLNLPRNCIRGHVDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKLGFS--EDELNMDETFGLALQKAVPLAAMVIP 507          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.140e-26
Identity = 58/164 (35.37%), Postives = 91/164 (55.49%), Query Frame = -2
Query:  210 HSKTMKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFK--GNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNG 695
            H +   K++ E+    G    + E  + K+ YL+AVIKET                 D ++GGY+IPA+S++++NAW +  +P  W++PE+F PERFL+  S  +  GNDF ++PFG GRR CPG   A+ I+ + +  L+  F+   P  Q  + +D  E  G
Sbjct:  325 HPEIQAKLRHELVSQLGPGVQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQ--DKVDTTEKGG 486          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25
Identity = 56/164 (34.15%), Postives = 92/164 (56.10%), Query Frame = -2
Query:  210 HSKTMKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFK--GNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNG 695
            H +   K++ E+    G    I E  ++ + YL+AV+KET                 D ++GG++IPA+S++++NAW +  +P  W++PE+F PERFL+  +  +  GNDF ++PFG GRR CPG   A+ I+ + +  L+  F+   P  Q +  +D DE  G
Sbjct:  325 HPEIQAKLRHELDTKLGPGVQITEPDVQNLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSK--IDTDEKGG 486          
The following BLAST results are available for this feature:
BLAST of CF834785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
TCMO_RUTGR2.176e-2736.59Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C71AR_ARATH2.176e-2739.43Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
TCMO_CATRO4.847e-2735.98Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_POPKI1.080e-2635.98Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_PETCR1.080e-2637.74Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_POPTM1.410e-2635.98Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_MEDSA1.842e-2635.98Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
C75A4_GENTR5.359e-2637.08Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
TCMO_ZINEL9.140e-2635.37Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_HELTU1.194e-2534.15Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834785 ID=CF834785; Name=CF834785; organism=Citrus sinensis; type=EST; length=696bp
TTTTTTTTTTTTTTTTTAGACAAAAAAGGTTAACGAAGCTCTTATTTATA
AATTATTTAGTGAAGAAAAGGGTAGAAACACCTCAAATGGTATAACCATT
CACCAAATATTTTAAGATAGATTTTTACAGACATTTCATTATCCCTTTGG
CTCTAGAAACGATGAGGAGTCGCAACAACTACAAGCGGGAACTTCCTGGG
AATGGTTATACCATTTGATTCATCGACATCCAAGTCCTCCTCTCTTTGTT
CATCTGGCAACGCCCAATCAAACTTGTACAATAGGTTTGACAATACAAGC
TCAACAATTGCAATAGCAAATGTAGCTCCAGGACACCCCCTTCTACCAGC
TCCGAAAGGAATGAAATGAAAATCATTCCCTTTGAAACTTGAACAGTTGT
CCAGGAACCTCTCAGGGTTAAATTTCTCTGGTTCTTCCCATGAAGCAGGA
TCTCTCCCTATTGCCCACGCATTGATAATAACTCTGGATTTGGCAGGAAT
GTTGTAGCCTCCTACCTGGACATCTTTTGTTGCTTGTCGCGGAAGCAGCA
ATGGAACTGGAGGGTGTAGTCGTAAAGTCTCCTTTATCACTGCCTTGAGG
TAAAACATTTTCTCTATATGATCTTCATTAATGTAAGATTTGCTTCCAGC
AATCCGTCTCACCTCTTCCTGCACCTTTTTCATAGTTTTGCTATGC
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