CF834785

Overview
NameCF834785
Unique NameCF834785
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: CP1A1_RAT (Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 45/164 (27.44%), Postives = 73/164 (44.51%), Query Frame = -2
Query:  201 KTMKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSF-KGNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNGITI 689
            +  +K+QEE+  + G           ++ YL+A I ET                +D  + G+ IP    V +N W +  D   W +P +F PERFL +  +  K      I FG G+R C G T     V L L+ LL + ++   +    E +D+  + G+T+
Sbjct:  342 RIQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTIRDTSLNGFYIPKGHCVFVNQWQVNHDQELWGDPNEFRPERFLTSSGTLDKHLSEKVILFGLGKRKCIGETIGRLEVFLFLAILLQQMEF---NVSPGEKVDMTPAYGLTL 502          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: CP1A1_ORYLA (Cytochrome P450 1A1 OS=Oryzias latipes GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 40/115 (34.78%), Postives = 58/115 (50.43%), Query Frame = -2
Query:  192 TKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFL--DNCSSFKGNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNGITIPRK 530
            T+D  + GY IP  + V IN W I  DP  W++P  FNP+RFL  D     + +    + FG G+R C G   A   V L L+ ++ K  +   +E   E LD+    G+T+  K
Sbjct:  396 TRDTSLNGYYIPKDTCVFINQWQINHDPKLWQDPSSFNPDRFLSEDGSEVNRLDGEKVMVFGLGKRRCIGEVIARNEVFLFLAIMIQKLCF---EEMPGEPLDMTPEYGLTMKHK 507          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: CP1A1_CHACA (Cytochrome P450 1A1 OS=Chaetodon capistratus GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 47/143 (32.87%), Postives = 67/143 (46.85%), Query Frame = -2
Query:  192 KMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFKGNDFH---FIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDESNGITIPRK 611
            K+ YL+A I E               + KD  + GY IP  + V IN W I RDP  W++P  FNP+RFL +C+  + N       + FG G+R C G   A   V   L+ L+ +  +    E   E LD+    G+T+  K
Sbjct:  369 KVPYLEAFILELFRHSSFLPFTIPHCSAKDTSLNGYFIPKDTCVFINQWQINRDPELWKDPSSFNPDRFL-SCNGTEVNKQEGEKVMVFGMGKRRCIGEVIARNEVYRGLAILIQRLQF---HEMPGELLDMTPEYGLTMKHK 507          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: C49A1_DROME (Probable cytochrome P450 49a1 OS=Drosophila melanogaster GN=Cyp49a1 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 43/146 (29.45%), Postives = 73/146 (50.00%), Query Frame = -2
Query:  270 KKVQEEVRRIAGSKSY-INEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFKG--------NDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKF 680
            KK+ +E++++   +   IN++ +E+M YL+A +KET                 D  + GY++P  + VI     +  DPA + EP++F PER+L   +   G        + F  +PFG GRR C G  FA   +  +L+ +  K+
Sbjct:  413 KKLFDELQKVFPHREADINQNVLEQMPYLRACVKETLRMRPVVIANGR-SLQSDAVINGYHVPKGTHVIFPHLVVSNDPAYFPEPKRFLPERWLKQSTDAAGCPHANQKIHPFVSLPFGFGRRMCVGRRFAEIELHTLLAKIFRKY 557          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: THAS_HUMAN (Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 44/124 (35.48%), Postives = 62/124 (50.00%), Query Frame = -2
Query:  246 EKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFKGNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDW-ALPDEQ 614
            E + YL  VI ET             +A +D +V G  IPA + + +   A+  DP  W  PE FNPERF       +   F ++PFGAG R C G    +  V+L L ++L+KF + A P+ Q
Sbjct:  388 EGLPYLDMVIAETLRMYPPAFRFTR-EAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSPETFNPERFTAEARQ-QHRPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFRFQACPETQ 509          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: CP2CV_CAPAE (Cytochrome P450 2C31 (Fragment) OS=Capra aegagrus GN=CYP2C31 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = -2
Query:  270 HSKTMKKVQEEVRRIAG-SKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFKGNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKF 695
            H +   KVQEE+ R+ G ++S   +D   +M Y  AV+ E               AT+DV+   Y IP  + ++ +  ++  D   +  P +F+P  FLD   +FK  D HF+ F AG+R C G   A   + L+L ++L  F
Sbjct:  110 HPEVTAKVQEEIDRVVGRNRSPCMQDR-SRMPYTDAVLHEIQRYIDLVPSNLPHVATQDVKFREYLIPKGTAILTSLTSVLHDGKEFPNPGQFDPAHFLDESGNFKKTD-HFMAFSAGKRVCVGEGLARMELFLLLVSILQHF 250          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: CP2CL_CANFA (Cytochrome P450 2C21 (Fragment) OS=Canis familiaris GN=CYP2C21 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 42/142 (29.58%), Postives = 66/142 (46.48%), Query Frame = -2
Query:  270 HSKTMKKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFKGNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKF 695
            H     KVQEE+ R+ G            M Y  AV+ E                T+D++   Y IP  + ++ +  ++  D   +  P++F+P  FLD   SFK +D+ F+ F AG+R C G   A   + L+L+N+L  F
Sbjct:  313 HPDVTAKVQEEIHRVVGRHRSPCMQDRSCMPYTDAVVHEIQRYIDLVPNNLPHSVTQDIKFREYLIPKGTTILTSLTSVLHDEKGFPNPDQFDPGHFLDENGSFKKSDY-FMAFSAGKRVCVGEGLARMELFLLLTNILQHF 453          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: CP2C7_RAT (Cytochrome P450 2C7 OS=Rattus norvegicus GN=Cyp2c7 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 42/137 (30.66%), Postives = 65/137 (47.45%), Query Frame = -2
Query:  267 KVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFKGNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFD 677
            KVQEE+ R+ G          + M Y  A+I E                T D++   Y IP  ++V+ +  ++  D   +  PE F+P  FLD   +FK +D+ F+PF AG+R C G   A   + L L+ +L  F+
Sbjct:  322 KVQEEIDRVIGRHRSPCMQDRKHMPYTDAMIHEVQRFINFVPTNLPHAVTCDIKFRNYLIPKGTKVLTSLTSVLHDSKEFPNPEMFDPGHFLDENGNFKKSDY-FLPFSAGKRACVGEGLARMQLFLFLTTILQNFN 457          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: CP2BB_CANFA (Cytochrome P450 2B11 OS=Canis familiaris GN=CYP2B11 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 47/154 (30.52%), Postives = 69/154 (44.81%), Query Frame = -2
Query:  219 KKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFLDNCSSFKGNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREEDLDVDE 680
            +++ +E+ ++ G     + D   KM Y  AVI E                TKD+   GY IP  + V     +   DP  +E+P+ FNP+ FLD   + K N+  FIPF  G+R C G   A   + L  + +L  F  A P    + DL   E
Sbjct:  322 ERIYKEIDQVIGPHRLPSLDDRAKMPYTDAVIHEIQRFGDLLPIGVPHMVTKDICFRGYIIPKGTEVFPILHSALNDPHYFEKPDVFNPDHFLDANGALKKNE-AFIPFSIGKRICLGEGIARMELFLFFTTILQNFSVASPMAPEDIDLTPQE 474          
BLAST of CF834785 vs. ExPASy Swiss-Prot
Match: CP1A5_CHICK (Cytochrome P450 1A5 OS=Gallus gallus GN=CYP1A5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 43/150 (28.67%), Postives = 67/150 (44.67%), Query Frame = -2
Query:  237 KKVQEEVRRIAGSKSYINEDHIEKMFYLKAVIKETXXXXXXXXXXXXRQATKDVQVGGYNIPAKSRVIINAWAIGRDPASWEEPEKFNPERFL--DNCSSFKGNDFHFIPFGAGRRGCPGATFAIAIVELVLSNLLYKFDWALPDEQREE 680
            KK+Q E+ +  G +          + Y +A I E                T+D  + GY IP    V IN W +  D   W++P+ FNPERFL  +     K +    + FG G+R C G       V L LS LL + ++++ D ++ +
Sbjct:  350 KKIQAELDQTIGRERRPRLSDRGMLPYTEAFILEMFRHSSFMPFTIPHSTTRDTVLNGYYIPKDRCVFINQWQVNHDEKLWKDPQAFNPERFLNAEGTEVNKVDAEKVMTFGLGKRRCIGENIGKWEVFLFLSTLLQQLEFSIQDGKKAD 499          
The following BLAST results are available for this feature:
BLAST of CF834785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
CP1A1_RAT4.869e-1127.44Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1... [more]
CP1A1_ORYLA4.869e-1134.78Cytochrome P450 1A1 OS=Oryzias latipes GN=cyp1a1 P... [more]
CP1A1_CHACA4.869e-1132.87Cytochrome P450 1A1 OS=Chaetodon capistratus GN=cy... [more]
C49A1_DROME4.869e-1129.45Probable cytochrome P450 49a1 OS=Drosophila melano... [more]
THAS_HUMAN6.359e-1135.48Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 P... [more]
CP2CV_CAPAE6.359e-1131.47Cytochrome P450 2C31 (Fragment) OS=Capra aegagrus ... [more]
CP2CL_CANFA6.359e-1129.58Cytochrome P450 2C21 (Fragment) OS=Canis familiari... [more]
CP2C7_RAT6.359e-1130.66Cytochrome P450 2C7 OS=Rattus norvegicus GN=Cyp2c7... [more]
CP2BB_CANFA6.359e-1130.52Cytochrome P450 2B11 OS=Canis familiaris GN=CYP2B1... [more]
CP1A5_CHICK6.359e-1128.67Cytochrome P450 1A5 OS=Gallus gallus GN=CYP1A5 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834785 ID=CF834785; Name=CF834785; organism=Citrus sinensis; type=EST; length=696bp
TTTTTTTTTTTTTTTTTAGACAAAAAAGGTTAACGAAGCTCTTATTTATA
AATTATTTAGTGAAGAAAAGGGTAGAAACACCTCAAATGGTATAACCATT
CACCAAATATTTTAAGATAGATTTTTACAGACATTTCATTATCCCTTTGG
CTCTAGAAACGATGAGGAGTCGCAACAACTACAAGCGGGAACTTCCTGGG
AATGGTTATACCATTTGATTCATCGACATCCAAGTCCTCCTCTCTTTGTT
CATCTGGCAACGCCCAATCAAACTTGTACAATAGGTTTGACAATACAAGC
TCAACAATTGCAATAGCAAATGTAGCTCCAGGACACCCCCTTCTACCAGC
TCCGAAAGGAATGAAATGAAAATCATTCCCTTTGAAACTTGAACAGTTGT
CCAGGAACCTCTCAGGGTTAAATTTCTCTGGTTCTTCCCATGAAGCAGGA
TCTCTCCCTATTGCCCACGCATTGATAATAACTCTGGATTTGGCAGGAAT
GTTGTAGCCTCCTACCTGGACATCTTTTGTTGCTTGTCGCGGAAGCAGCA
ATGGAACTGGAGGGTGTAGTCGTAAAGTCTCCTTTATCACTGCCTTGAGG
TAAAACATTTTCTCTATATGATCTTCATTAATGTAAGATTTGCTTCCAGC
AATCCGTCTCACCTCTTCCTGCACCTTTTTCATAGTTTTGCTATGC
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