CF834796
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834796 vs. ExPASy Swiss-Prot
Match: IF4A3_BOVIN (Eukaryotic initiation factor 4A-III OS=Bos taurus GN=EIF4A3 PE=2 SV=3) HSP 1 Score: 189.504 bits (480), Expect = 1.400e-47 Identity = 91/135 (67.41%), Postives = 113/135 (83.70%), Query Frame = -2 Query: 279 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 683 ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADL+ Sbjct: 277 ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
BLAST of CF834796 vs. ExPASy Swiss-Prot
Match: I4A3B_XENLA (Eukaryotic initiation factor 4A-III-B OS=Xenopus laevis GN=eif4a3-B PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.400e-47 Identity = 91/135 (67.41%), Postives = 113/135 (83.70%), Query Frame = -2 Query: 279 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 683 ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADL+ Sbjct: 280 ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 414
BLAST of CF834796 vs. ExPASy Swiss-Prot
Match: FAL1_AJECN (ATP-dependent RNA helicase FAL1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=FAL1 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.400e-47 Identity = 92/130 (70.77%), Postives = 110/130 (84.62%), Query Frame = -2 Query: 294 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSN 683 ITQ+VIF NTRRKVDWLTDKMR + TVS+ HG+M Q RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP+ ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+ +Y+ I+E+P N Sbjct: 264 ITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMN 393
BLAST of CF834796 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.074e-47 Identity = 88/135 (65.19%), Postives = 114/135 (84.44%), Query Frame = -2 Query: 279 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 683 ++Q+VIF NTRRKVD+LT + D TVS+ HG+ +Q+ RD+IM+ FR+GSSR+LITTDLLARGIDVQQVSLVIN+DLP+ ENY+HRIGR GRFGRKGVAINFVT +D ML ++++FY+ I E+P+N+ADL+ Sbjct: 261 VSQAVIFCNTRRKVDYLTQALTEADFTVSSMHGETEQSQRDVIMKAFRTGSSRILITTDLLARGIDVQQVSLVINFDLPSNRENYIHRIGRGGRFGRKGVAINFVTSEDHGMLKELERFYSTEIVEMPTNIADLI 395
BLAST of CF834796 vs. ExPASy Swiss-Prot
Match: IF4A_PICGU (ATP-dependent RNA helicase eIF4A OS=Pichia guilliermondii GN=TIF1 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.948e-47 Identity = 90/134 (67.16%), Postives = 111/134 (82.84%), Query Frame = -2 Query: 282 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 683 +TQ+VIF NTR KV++LT K+++ + TVSA H D+ Q+ RD IM EFRSGSSR+LI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D M+ +I+KFY+ IEE+P+N+ +L Sbjct: 261 VTQAVIFCNTRSKVEFLTTKLKAENFTVSAIHADLPQSDRDTIMNEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDEDVGMMREIEKFYSTQIEEMPANIGEL 394
BLAST of CF834796 vs. ExPASy Swiss-Prot
Match: I4A3A_XENLA (Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis GN=eif4a3-A PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.075e-47 Identity = 90/135 (66.67%), Postives = 112/135 (82.96%), Query Frame = -2 Query: 279 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 683 ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+G KGVAINFV DD R+L DI+++Y+ I+E+P NVADL+ Sbjct: 281 ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGGKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 415
BLAST of CF834796 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 185.652 bits (470), Expect = 2.022e-46 Identity = 92/135 (68.15%), Postives = 111/135 (82.22%), Query Frame = -2 Query: 279 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 683 +TQ+VIF NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D + +++KFY+ IEELPS++A LL Sbjct: 260 VTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 394
BLAST of CF834796 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.022e-46 Identity = 92/135 (68.15%), Postives = 111/135 (82.22%), Query Frame = -2 Query: 279 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 683 +TQ+VIF NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D + +++KFY+ IEELPS++A LL Sbjct: 260 VTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 394
BLAST of CF834796 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.022e-46 Identity = 90/134 (67.16%), Postives = 112/134 (83.58%), Query Frame = -2 Query: 282 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 683 +TQ+VIF NTRRKV+ LT K+ + TVS+ + D+ Q RD+IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D + +I+KFY+ IEELP++VA++ Sbjct: 261 VTQAVIFCNTRRKVEELTQKLTESNFTVSSIYSDLPQQERDVIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMREIEKFYSTQIEELPADVAEM 394
BLAST of CF834796 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.022e-46 Identity = 90/135 (66.67%), Postives = 108/135 (80.00%), Query Frame = -2 Query: 279 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 683 ITQ+VIF NT++KVDWLT +M+ + TV + HGDM Q RD IM EFRSG SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF T DD L DI+++Y+ I+E+P NV D++ Sbjct: 263 ITQAVIFCNTKKKVDWLTQQMKDNNFTVCSMHGDMAQKDRDSIMNEFRSGRSRVLISTDVWARGIDVQQVSLVINYDLPPNRENYIHRIGRSGRFGRKGVAINFATNDDITTLRDIEQYYSTQIDEMPVNVTDMM 397 The following BLAST results are available for this feature:
BLAST of CF834796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834796 ID=CF834796; Name=CF834796; organism=Citrus sinensis; type=EST; length=684bpback to top |