CF834798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.022e-50 Identity = 94/149 (63.09%), Postives = 123/149 (82.55%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 ++K + LCDLY+++++TQ+VIF NTR KV++LT K+++ + TVSA H D+ Q RD IM+EFRSGSSR+LI TDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKGVAINFVT D M+ +I++FY+ IEE+P+++ L Sbjct: 247 DYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKAENFTVSAIHADLPQAERDTIMKEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGVAINFVTERDVGMMREIEQFYSTQIEEMPADIGAL 395
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.003e-49 Identity = 94/149 (63.09%), Postives = 121/149 (81.21%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 ++K + L DLY+++++TQ+VIF NTR KV++LT+K+R + TVSA H D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+ +I+KFY+ I E+P+++ L Sbjct: 247 DYKFDCLVDLYDSISVTQAVIFCNTRSKVEFLTNKLREQKFTVSAIHADLPQGERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDKDVGMMREIEKFYSTQITEMPADIGSL 395
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: FAL1_ASHGO (ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii GN=FAL1 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.003e-49 Identity = 93/149 (62.42%), Postives = 120/149 (80.54%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 EWK +TLCDLY++L ITQ VIF NT++KVDWL+ K+ + V++ HGDM Q+ RD +M +FRSGSSRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+TR++ L I+K Y++ I+ +P+++ L Sbjct: 249 EWKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSHKLIQNNFAVASIHGDMKQDDRDKVMSDFRSGSSRVLISTDVWARGIDVQQVSLVINYDLPELLENYIHRIGRSGRFGRKGVAINFITREEVTKLKSIEKHYSIKIKPMPADIDSL 397
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49 Identity = 92/149 (61.74%), Postives = 124/149 (83.22%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 ++K + L DLY+++++TQ+VIF NTRRKV+ LT+++R + TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKG+AINFVT D + ++++FY+ IEELPS++++L Sbjct: 246 QYKYDCLTDLYDSISVTQAVIFCNTRRKVEELTERLRENNFTVSAIYSDLQQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGIAINFVTNKDIGAMRELERFYSTQIEELPSSISEL 394
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.920e-49 Identity = 92/149 (61.74%), Postives = 118/149 (79.19%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 EWK +TLCD+Y++L ITQ VIF NT++KVDWL+ ++ + V + HGDM Q RD +M +FR+G SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+T+ D L +I+KFY++ I +P+N A+L Sbjct: 250 EWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMPANFAEL 398
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.920e-49 Identity = 92/149 (61.74%), Postives = 118/149 (79.19%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 EWK +TLCD+Y++L ITQ VIF NT++KVDWL+ ++ + V + HGDM Q RD +M +FR+G SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+T+ D L +I+KFY++ I +P+N A+L Sbjct: 250 EWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMPANFAEL 398
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.920e-49 Identity = 90/149 (60.40%), Postives = 118/149 (79.19%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 EWK +TLCDLY++L ITQ VIF NTR+KVDWL+ K+ + +VS+ HGDM Q RD +M +FRSG +RVLI+TD+ ARGIDVQQ+SLVINYD+P ENY+HRIGRSGRFGRKGVAINF+T+++ L +I+ Y + I+ P+N+ +L Sbjct: 249 EWKFDTLCDLYDSLTITQCVIFCNTRKKVDWLSRKLTQTNFSVSSMHGDMKQEERDQVMNDFRSGKARVLISTDVWARGIDVQQISLVINYDIPDNLENYIHRIGRSGRFGRKGVAINFITKEERPKLKEIESHYRIKIKPTPANLEEL 397
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: FAL1_PICGU (ATP-dependent RNA helicase FAL1 OS=Pichia guilliermondii GN=FAL1 PE=3 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 3.813e-49 Identity = 92/150 (61.33%), Postives = 118/150 (78.67%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 +WK +TLCDLY+ L ITQ+VIF NT+ KV+WL +MR + TV+A HGDM Q RD IM+EFRSGS+RVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKG AIN +T D+ L +Q +Y+ I E+P++++ ++ Sbjct: 248 DWKFDTLCDLYDNLTITQAVIFCNTKAKVNWLAGQMRKSNFTVAAMHGDMKQEDRDSIMKEFRSGSTRVLISTDVWARGIDVQQVSLVINYDLPLDKENYVHRIGRSGRFGRKGTAINLLTSQDKDELKSLQHYYSTKIREVPADLSKIM 397
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.109e-48 Identity = 88/149 (59.06%), Postives = 120/149 (80.54%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 EWK +TLCD+Y++L ITQ VIF N+++KVDWL K++ + V + HGDM Q+ RD +M EFR+G SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+T+ D + +I+K+Y + ++ +P+++++L Sbjct: 250 EWKFDTLCDIYDSLTITQCVIFCNSKKKVDWLAHKLKQSNFAVISMHGDMKQDERDRVMNEFRTGQSRVLISTDVWARGIDVQQVSLVINYDLPEITENYVHRIGRSGRFGRKGVAINFLTKIDASRMKEIEKYYKIKVKPMPADLSEL 398
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.472e-48 Identity = 92/150 (61.33%), Postives = 117/150 (78.00%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 E KL+TL DLYET++I QSVIF NTRRKVDW+ +K+ +HTVS+ H +M ++ R+ +M FRSGSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIGR GR+GRKGVAINFVT D +L +I+ Y+ I+ELP + A L Sbjct: 252 EHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTEKDVELLHEIEAHYHTQIDELPVDFAAYL 401 The following BLAST results are available for this feature:
BLAST of CF834798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834798 ID=CF834798; Name=CF834798; organism=Citrus sinensis; type=EST; length=738bpback to top |