CF834798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.472e-48 Identity = 92/150 (61.33%), Postives = 117/150 (78.00%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 E KL+TL DLYET++I QSVIF NTRRKVDW+ +K+ +HTVS+ H +M ++ R+ +M FRSGSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIGR GR+GRKGVAINFVT D +L +I+ Y+ I+ELP + A L Sbjct: 252 EHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTEKDVELLHEIEAHYHTQIDELPVDFAAYL 401
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.472e-48 Identity = 91/149 (61.07%), Postives = 122/149 (81.88%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 ++K + L DLY+++++TQ+VIF NTRRKV+ LT ++ + + TVS+ + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINF+ +D + L ++++FY+ IEELPS++ L Sbjct: 246 QFKYDCLTDLYDSISVTQAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFIVNEDVQALRELEQFYSTQIEELPSDIGTL 394
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48 Identity = 92/150 (61.33%), Postives = 117/150 (78.00%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 E KL+TL DLYET++I QSVIF NTRRKVDW+ +K+ +HTVS+ H +M ++ R+ +M FRSGSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIGR GR+GRKGVAINFVT D +L +I+ Y+ I+ELP + A L Sbjct: 252 EHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTEKDVELLHEIEGHYHTQIDELPVDFAAYL 401
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_TRYBB (Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei GN=Tb09.160.3270 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 7.192e-48 Identity = 93/150 (62.00%), Postives = 116/150 (77.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 E KL+TL DLYET++I QSVIF NTRRKVDWL ++ S +HTVS H +M + R+ +M FR+GSSRVL+TTDL+ARGIDV V++VIN+DLPT ENYLHRIGR GR+GRKGVAINFVT+ D +L +I+ Y+ IEELP + A L Sbjct: 253 EHKLDTLMDLYETVSIAQSVIFANTRRKVDWLASQLNSSNHTVSCMHSEMSKQEREKVMGTFRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTQKDVEVLREIESHYHTQIEELPVDFAAYL 402
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.392e-48 Identity = 93/149 (62.42%), Postives = 119/149 (79.87%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 E+K + L DLY+++++TQ+VIF NTRRKV+ LT ++ TVSA + D+ Q RD IM+EFR+GSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAIN VT D + ++++FY+ IEELP+N+ADL Sbjct: 246 EYKYDCLSDLYDSISVTQAVIFCNTRRKVEELTKRLTDDSFTVSAIYSDLPQAQRDTIMKEFRTGSSRILISTDLLARGIDVQQVSLVINYDLPNNKENYIHRIGRGGRFGRKGVAINLVTDRDVGDMRELERFYSTQIEELPANIADL 394
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.951e-47 Identity = 87/149 (58.39%), Postives = 116/149 (77.85%), Query Frame = -2 Query: 291 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 737 +WK +TLCDLY++L ITQ VIF NT++KVDWL+ K+ + V + HGDM Q R+ +M +FRSG SRVLI+TD+ ARGIDVQQVSLVINYD+P ENY+HRIGRSGRFGRKGVAINF+T D + +I+K+Y + I +P++++ + Sbjct: 250 DWKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMKQEDRNKVMSDFRSGHSRVLISTDVWARGIDVQQVSLVINYDIPEIMENYIHRIGRSGRFGRKGVAINFITSSDLSKMKEIEKYYRIKISPVPADLSTI 398
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_TRYCR (Probable eukaryotic initiation factor 4A OS=Trypanosoma cruzi GN=Tc00.1047053511585.190 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.771e-46 Identity = 90/150 (60.00%), Postives = 115/150 (76.67%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 E KL+TL DLYET++I QSVIF NTRRKVDWL ++ +HTVS H +M + R+ +M FR+GSSRVL+TTDL+ARGIDV V++VIN+DLPT E+YLHRIGR GR+GRKGVAINFVT+ D +L +I+ Y+ I+ELP + A L Sbjct: 253 EHKLDTLMDLYETVSIAQSVIFANTRRKVDWLAQQLNQSNHTVSCMHSEMPKQDREKVMSTFRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKESYLHRIGRGGRYGRKGVAINFVTQKDVEVLREIESHYHTQIDELPVDFAAYL 402
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.313e-46 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = -2 Query: 462 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 737 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD Sbjct: 264 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 355
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: RH34_ARATH (DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 1.148e-45 Identity = 89/146 (60.96%), Postives = 110/146 (75.34%), Query Frame = -2 Query: 300 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNV 737 EWK +TLCDLY L I Q++IF NTR+KVDWLT+KMRS + VS+ HGD Q RD IM +FRS SRVLI +D+ ARGIDVQ VS VINYD+P PE Y+HRIGR+GRFGR+GVAINFV D + L DI++ Y I E+P+++ Sbjct: 246 EWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIREMPADL 391
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A2_ORYSJ (Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica GN=Os02g0221300 PE=3 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.230e-39 Identity = 87/148 (58.78%), Postives = 109/148 (73.65%), Query Frame = -2 Query: 288 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 731 KL+ LC L++T+ IT+S+IFVNTR LT+K+R + +TVSA HG + Q RD ++EF+SGSSR+LITTDL RGIDV + I YDLPTQP YL + +SG+ GRKGVAI+F+T DER+ IQKF N IEELPSNVADLL Sbjct: 272 KLDKLCGLFDTMEITRSIIFVNTRHHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDL--RGIDVLRAPAAIFYDLPTQPVCYLRHV-QSGQHGRKGVAISFITSTDERVFSTIQKFCNTQIEELPSNVADLL 416 The following BLAST results are available for this feature:
BLAST of CF834798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834798 ID=CF834798; Name=CF834798; organism=Citrus sinensis; type=EST; length=738bpback to top |