CF834798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_USTMA (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis GN=TIF1 PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.083e-63 Identity = 117/150 (78.00%), Postives = 134/150 (89.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 +WKL+TLCDLYET+ ITQ+VIF NTRRKVDWLTDK+ SR+ TVSA HGDM+Q R++IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKGVAINFVT DD RML DI++FY+ I+E+P NVADL+ Sbjct: 262 DWKLDTLCDLYETVTITQAVIFCNTRRKVDWLTDKLTSREFTVSAMHGDMEQAQREVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTSDDVRMLRDIEQFYSTQIDEMPLNVADLI 411
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_CHAGB (ATP-dependent RNA helicase eIF4A OS=Chaetomium globosum GN=TIF1 PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.303e-62 Identity = 115/150 (76.67%), Postives = 132/150 (88.00%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 +WKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+++RD TVSA HGDMDQ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 248 DWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLQARDFTVSAMHGDMDQTQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 397
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_ASPTN (ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif1 PE=3 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 2.303e-62 Identity = 116/150 (77.33%), Postives = 132/150 (88.00%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q+ RDIIM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 247 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDIIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 396
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_NEUCR (ATP-dependent RNA helicase eIF4A OS=Neurospora crassa GN=tif-1 PE=3 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 3.007e-62 Identity = 116/150 (77.33%), Postives = 131/150 (87.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 248 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 397
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_MAGGR (ATP-dependent RNA helicase eIF4A OS=Magnaporthe grisea GN=TIF1 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.007e-62 Identity = 116/150 (77.33%), Postives = 131/150 (87.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 247 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 396
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_ASPOR (ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae GN=tif1 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.007e-62 Identity = 115/150 (76.67%), Postives = 132/150 (88.00%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q+ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 272 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 421
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.007e-62 Identity = 115/150 (76.67%), Postives = 132/150 (88.00%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q+ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 249 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_COCIM (ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.928e-62 Identity = 115/150 (76.67%), Postives = 132/150 (88.00%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HG+M+QN RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 249 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLIARDFTVSAMHGEMEQNQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.928e-62 Identity = 115/150 (76.67%), Postives = 131/150 (87.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 +WKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 249 DWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.928e-62 Identity = 115/150 (76.67%), Postives = 131/150 (87.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 249 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQGQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398 The following BLAST results are available for this feature:
BLAST of CF834798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834798 ID=CF834798; Name=CF834798; organism=Citrus sinensis; type=EST; length=738bpback to top |