CF834798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.130e-62 Identity = 115/150 (76.67%), Postives = 131/150 (87.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 +WKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 247 DWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 396
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.700e-62 Identity = 115/150 (76.67%), Postives = 131/150 (87.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 249 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.700e-62 Identity = 115/150 (76.67%), Postives = 131/150 (87.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 272 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 421
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.143e-61 Identity = 114/150 (76.00%), Postives = 131/150 (87.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 +WKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D RM+ +I++FY+ IEE+P NVADL+ Sbjct: 249 DWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDVRMMREIEQFYSTQIEEMPMNVADLI 398
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_SCHPO (ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe GN=tif1 PE=1 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 2.546e-61 Identity = 110/150 (73.33%), Postives = 130/150 (86.67%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKL+TLCDLYET+ +TQ+VIF NTRRKVDWLT+++ RD TVS+ HGDMDQ RD +M EFR+GSSR+LITTDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGV+INFVT DD RM+ +I++FYN IEE+P N+ADL+ Sbjct: 243 EWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMPMNIADLI 392
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.650e-60 Identity = 113/147 (76.87%), Postives = 128/147 (87.07%), Query Frame = -2 Query: 297 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVA 737 EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVA Sbjct: 249 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVA 395
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.676e-60 Identity = 110/150 (73.33%), Postives = 129/150 (86.00%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWKLETLCDLYET+ ITQ+VIF +TRRKVDWLT ++ R TVSA HGDM Q R++IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKGVAINFV+ +D+ ML +I+ +YN +EE+P NVADL+ Sbjct: 252 EWKLETLCDLYETVTITQAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGDMKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSSKENYIHRIGRGGRFGRKGVAINFVSNEDKNMLEEIETYYNTQVEEMPLNVADLI 401
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 2.383e-59 Identity = 110/149 (73.83%), Postives = 130/149 (87.25%), Query Frame = -2 Query: 288 WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 734 WKL TLCDLY+TL+ITQSVIF NTRRKVD LT +M + TVSA HGDM+Q R++IM++FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKGVAINF+T DD R+L DI++FY+ IEE+P+N+ADL+ Sbjct: 255 WKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 403
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: FAL1_NEOFI (ATP-dependent RNA helicase fal1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=fal1 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.309e-59 Identity = 110/150 (73.33%), Postives = 128/150 (85.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HG+M Q RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKGVAINFVT DD R+L DI+ +Y+ I+E+P NVADLL Sbjct: 249 EWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLL 398
BLAST of CF834798 vs. ExPASy Swiss-Prot
Match: FAL1_EMENI (ATP-dependent RNA helicase fal1 OS=Emericella nidulans GN=fal1 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.309e-59 Identity = 110/150 (73.33%), Postives = 128/150 (85.33%), Query Frame = -2 Query: 288 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 737 EWK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HG+M Q RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKGVAINFVT DD R+L DI+ +Y+ I+E+P NVADLL Sbjct: 249 EWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLL 398 The following BLAST results are available for this feature:
BLAST of CF834798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834798 ID=CF834798; Name=CF834798; organism=Citrus sinensis; type=EST; length=738bpback to top |