CF834799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.613e-62 Identity = 115/154 (74.68%), Postives = 133/154 (86.36%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 + + +WKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 243 VEKEDWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 396
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.719e-62 Identity = 115/154 (74.68%), Postives = 133/154 (86.36%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 + + EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 245 VEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.719e-62 Identity = 115/154 (74.68%), Postives = 133/154 (86.36%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 + + EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVADL+ Sbjct: 268 VEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 421
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.049e-62 Identity = 114/154 (74.03%), Postives = 133/154 (86.36%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 + + +WKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D RM+ +I++FY+ IEE+P NVADL+ Sbjct: 245 VEKEDWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDVRMMREIEQFYSTQIEEMPMNVADLI 398
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_SCHPO (ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe GN=tif1 PE=1 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 1.793e-61 Identity = 110/154 (71.43%), Postives = 132/154 (85.71%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 + + EWKL+TLCDLYET+ +TQ+VIF NTRRKVDWLT+++ RD TVS+ HGDMDQ RD +M EFR+GSSR+LITTDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGV+INFVT DD RM+ +I++FYN IEE+P N+ADL+ Sbjct: 239 VEKEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMPMNIADLI 392
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.162e-60 Identity = 113/151 (74.83%), Postives = 130/151 (86.09%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVA 458 + + EWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+ +I++FY+ IEE+P NVA Sbjct: 245 VEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVA 395
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.589e-60 Identity = 110/154 (71.43%), Postives = 131/154 (85.06%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 + + EWKLETLCDLYET+ ITQ+VIF +TRRKVDWLT ++ R TVSA HGDM Q R++IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKGVAINFV+ +D+ ML +I+ +YN +EE+P NVADL+ Sbjct: 248 VEKEEWKLETLCDLYETVTITQAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGDMKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSSKENYIHRIGRGGRFGRKGVAINFVSNEDKNMLEEIETYYNTQVEEMPLNVADLI 401
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 1.285e-59 Identity = 110/154 (71.43%), Postives = 133/154 (86.36%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 +++ WKL TLCDLY+TL+ITQSVIF NTRRKVD LT +M + TVSA HGDM+Q R++IM++FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKGVAINF+T DD R+L DI++FY+ IEE+P+N+ADL+ Sbjct: 250 VKQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 403
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: FAL1_NEOFI (ATP-dependent RNA helicase fal1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=fal1 PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.739e-59 Identity = 110/154 (71.43%), Postives = 130/154 (84.42%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 + + EWK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HG+M Q RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKGVAINFVT DD R+L DI+ +Y+ I+E+P NVADLL Sbjct: 245 VEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLL 398
BLAST of CF834799 vs. ExPASy Swiss-Prot
Match: FAL1_EMENI (ATP-dependent RNA helicase fal1 OS=Emericella nidulans GN=fal1 PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.739e-59 Identity = 110/154 (71.43%), Postives = 130/154 (84.42%), Query Frame = 3 Query: 6 LRRYEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 467 + + EWK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HG+M Q RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKGVAINFVT DD R+L DI+ +Y+ I+E+P NVADLL Sbjct: 245 VEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLL 398 The following BLAST results are available for this feature:
BLAST of CF834799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834799 ID=CF834799; Name=CF834799; organism=Citrus sinensis; type=EST; length=702bpback to top |